Detailed information of g1143.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAJ8022346.1, Leucine-, glutamate- and lysine-rich protein 1 [Holothuria leucospilota]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6DFC6WD repeat-containing protein 75 OS=Xenopus laevis OX=8355 GN=wdr75 PE=2 SV=1
Q7ZVR1WD repeat-containing protein 75 OS=Danio rerio OX=7955 GN=wdr75 PE=2 SV=2
Q3U821WD repeat-containing protein 75 OS=Mus musculus OX=10090 GN=Wdr75 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00999Na_H_ExchangerSodium/hydrogen exchanger familyFamilyInterproscan
PF02775TPP_enzyme_CThiamine pyrophosphate enzyme, C-terminal TPP binding domainDomainInterproscan
PF00205TPP_enzyme_MThiamine pyrophosphate enzyme, central domainDomainInterproscan
PF10226CCDC85CCDC85 familyFamilyInterproscan
PF03131bZIP_MafbZIP Maf transcription factorCoiled-coilInterproscan
PF00189Ribosomal_S3_CRibosomal protein S3, C-terminal domainDomainInterproscan
PF07650KH_2KH domainDomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF10296MMM1Maintenance of mitochondrial morphology protein 1FamilyInterproscan
PF17820PDZ_6PDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006153DomainCation/H+ exchangerInterproscan
IPR018422FamilyCation/H+ exchanger, CPA1 familyInterproscan
IPR029035Homologous_superfamilyDHS-like NAD/FAD-binding domain superfamilyInterproscan
IPR045229FamilyThiamine pyrophosphate enzymeInterproscan
IPR029061Homologous_superfamilyThiamin diphosphate-binding foldInterproscan
IPR011766DomainThiamine pyrophosphate enzyme, TPP-bindingInterproscan
IPR012000DomainThiamine pyrophosphate enzyme, central domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019359FamilyCCDC85 familyInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR024874FamilyTranscription factor Maf familyInterproscan
IPR008917Homologous_superfamilyTranscription factor, Skn-1-like, DNA-binding domain superfamilyInterproscan
IPR004826DomainBasic leucine zipper domain, Maf-typeInterproscan
IPR015946Homologous_superfamilyK homology domain-like, alpha/betaInterproscan
IPR001351DomainSmall ribosomal subunit protein uS3, C-terminalInterproscan
IPR009019Homologous_superfamilyK homology domain superfamily, prokaryotic typeInterproscan
IPR036419Homologous_superfamilyRibosomal protein S3, C-terminal domain superfamilyInterproscan
IPR005703FamilySmall ribosomal subunit protein uS3, eukaryotic/archaealInterproscan
IPR004044DomainK Homology domain, type 2Interproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR001478DomainPDZ domainInterproscan
IPR019411DomainMMM1 domainInterproscan
IPR031468DomainSynaptotagmin-like mitochondrial-lipid-binding domainInterproscan
IPR039275FamilyPDZ domain-containing protein 8Interproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR041489DomainPDZ domain 6Interproscan
IPR038799FamilyProtein LEKR1Interproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10110SODIUM/HYDROGEN EXCHANGERInterproscan
PTHR18968THIAMINE PYROPHOSPHATE ENZYMESInterproscan
PTHR44215WD REPEAT-CONTAINING PROTEIN 75Interproscan
PTHR13546RE60986PInterproscan
PTHR10129TRANSCRIPTION FACTOR MAFInterproscan
PTHR1176030S/40S RIBOSOMAL PROTEIN S3Interproscan
PTHR21519PDZ DOMAIN-CONTAINING PROTEIN 8Interproscan
PTHR34251LEUCINE-, GLUTAMATE- AND LYSINE-RICH PROTEIN 1Interproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006812Biological Processmonoatomic cation transportInterproscan
GO:0015297Molecular Functionantiporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:1902600Biological Processproton transmembrane transportInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0015385Molecular Functionsodium:proton antiporter activityInterproscan
GO:0015386Molecular Functionpotassium:proton antiporter activityInterproscan
GO:0051453Biological Processregulation of intracellular pHInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0098719Biological Processsodium ion import across plasma membraneInterproscan
GO:0003984Molecular Functionacetolactate synthase activityInterproscan
GO:0005948Cellular Componentacetolactate synthase complexInterproscan
GO:0009097Biological Processisoleucine biosynthetic processInterproscan
GO:0009099Biological ProcessL-valine biosynthetic processInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0030976Molecular Functionthiamine pyrophosphate bindingInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0045943Biological Processpositive regulation of transcription by RNA polymerase IInterproscan
GO:2000234Biological Processpositive regulation of rRNA processingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:2001235Biological Processpositive regulation of apoptotic signaling pathwayInterproscan
GO:0015935Cellular Componentsmall ribosomal subunitInterproscan
GO:0008289Molecular Functionlipid bindingInterproscan
GO:0044233Cellular Componentmitochondria-associated endoplasmic reticulum membrane contact siteInterproscan
GO:0051560Biological Processmitochondrial calcium ion homeostasisInterproscan
GO:1990456Biological Processmitochondrion-endoplasmic reticulum membrane tetheringInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09037MAFF_G_K; transcription factor MAFF/G/K-Ribosome biogenesisko03009deepkoala
Transcription factorsko03000deepkoala

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