Detailed information of g1146.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: RLA06568.1, hypothetical protein DRQ51_09060, partial [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8UWA5Carbonic anhydrase 2 OS=Pseudaspius hakonensis OX=3004147 GN=ca2 PE=2 SV=3
P43166Carbonic anhydrase 7 OS=Homo sapiens OX=9606 GN=CA7 PE=1 SV=1
Q9ERQ8Carbonic anhydrase 7 OS=Mus musculus OX=10090 GN=Ca7 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00989PASPAS foldDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF14598PAS_11PAS domainDomainInterproscan
PF00194Carb_anhydraseEukaryotic-type carbonic anhydraseDomainInterproscan
PF00364Biotin_lipoylBiotin-requiring enzymeDomainInterproscan
PF02817E3_bindinge3 binding domainFamilyInterproscan
PF001982-oxoacid_dh2-oxoacid dehydrogenases acyltransferase (catalytic domain)DomainInterproscan
PF11594Med28Mediator complex subunit 28FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF21787TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF21788TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan
PF14312FG-GAP_2FG-GAP repeatRepeatInterproscan
PF12733Cadherin-likeCadherin-like beta sandwich domainDomainInterproscan
PF00822PMP22_ClaudinPMP-22/EMP/MP20/Claudin familyFamilyInterproscan
PF03720UDPG_MGDP_dh_CUDP-glucose/GDP-mannose dehydrogenase family, UDP binding domainDomainInterproscan
PF00984UDPG_MGDP_dhUDP-glucose/GDP-mannose dehydrogenase family, central domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR013767DomainPAS foldInterproscan
IPR000014DomainPAS domainInterproscan
IPR001067FamilyNuclear translocatorInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR050933FamilyCircadian Clock Transcription FactorsInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR018338Conserved_siteCarbonic anhydrase, alpha-class, conserved siteInterproscan
IPR036398Homologous_superfamilyAlpha carbonic anhydrase domain superfamilyInterproscan
IPR001148DomainAlpha carbonic anhydrase domainInterproscan
IPR023561FamilyCarbonic anhydrase, alpha-classInterproscan
IPR036625Homologous_superfamilyE3-binding domain superfamilyInterproscan
IPR011053Homologous_superfamilySingle hybrid motifInterproscan
IPR000089DomainBiotin/lipoyl attachmentInterproscan
IPR050743Family2-oxoacid dehydrogenase family, E2 componentInterproscan
IPR023213Homologous_superfamilyChloramphenicol acetyltransferase-like domain superfamilyInterproscan
IPR004167DomainPeripheral subunit-binding domainInterproscan
IPR001078Domain2-oxoacid dehydrogenase acyltransferase, catalytic domainInterproscan
IPR003016Binding_site2-oxo acid dehydrogenase, lipoyl-binding siteInterproscan
IPR021640FamilyMediator complex, subunit Med28Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR052224FamilyTHAP domain-containing proteinInterproscan
IPR038441Homologous_superfamilyTHAP-type zinc finger superfamilyInterproscan
IPR048365DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan
IPR048366DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR025883DomainCadherin-like beta sandwich domainInterproscan
IPR004031FamilyPMP-22/EMP/MP20/ClaudinInterproscan
IPR036220Homologous_superfamilyUDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamilyInterproscan
IPR008927Homologous_superfamily6-phosphogluconate dehydrogenase-like, C-terminal domain superfamilyInterproscan
IPR017476FamilyUDP-glucose/GDP-mannose dehydrogenaseInterproscan
IPR014027DomainUDP-glucose/GDP-mannose dehydrogenase, C-terminalInterproscan
IPR028357FamilyUDP-glucose 6-dehydrogenase, bacterial typeInterproscan
IPR014026DomainUDP-glucose/GDP-mannose dehydrogenase, dimerisationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23042CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PASInterproscan
PTHR18952CARBONIC ANHYDRASEInterproscan
PTHR43178DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEXInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR46927AGAP005574-PAInterproscan
PTHR36220UNNAMED PRODUCTInterproscan
PTHR43750UDP-GLUCOSE 6-DEHYDROGENASE TUADInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0034751Cellular Componentaryl hydrocarbon receptor complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004089Molecular Functioncarbonate dehydratase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0016407Molecular Functionacetyltransferase activityInterproscan
GO:0031405Molecular Functionlipoic acid bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0000271Biological Processpolysaccharide biosynthetic processInterproscan
GO:0003979Molecular FunctionUDP-glucose 6-dehydrogenase activityInterproscan

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