Detailed information of g1148.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: HHZ85998.1, aldehyde dehydrogenase family protein [Candidatus Lambdaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
C5D4J51-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus sp. (strain WCH70) OX=471223 GN=rocA PE=3 SV=1
Q5L3K81-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rocA PE=3 SV=1
A4IJP91-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=rocA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02586SRAPSOS response associated peptidase (SRAP)FamilyInterproscan
PF13525YfiOOuter membrane lipoproteinRepeatInterproscan
PF00171AldedhAldehyde dehydrogenase familyFamilyInterproscan
PF01619Pro_dhProline dehydrogenaseFamilyInterproscan
PF00107ADH_zinc_NZinc-binding dehydrogenaseDomainInterproscan
PF08240ADH_NAlcohol dehydrogenase GroES-like domainDomainInterproscan
PF00397WWWW domainDomainInterproscan
PF01846FFFF domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036590Homologous_superfamilySOS response associated peptidase-likeInterproscan
IPR003738FamilySOS response associated peptidase (SRAP)Interproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR039565DomainOuter membrane lipoprotein BamD-likeInterproscan
IPR017689FamilyOuter membrane protein assembly factor BamDInterproscan
IPR012327FamilyD12 class N6 adenine-specific DNA methyltransferaseInterproscan
IPR023095Homologous_superfamilyAdenine-specific methyltransferase, domain 2Interproscan
IPR016160Conserved_siteAldehyde dehydrogenase, cysteine active siteInterproscan
IPR015590DomainAldehyde dehydrogenase domainInterproscan
IPR029041Homologous_superfamilyFAD-linked oxidoreductase-likeInterproscan
IPR025703FamilyBifunctional protein PutAInterproscan
IPR016162Homologous_superfamilyAldehyde dehydrogenase, N-terminalInterproscan
IPR016161Homologous_superfamilyAldehyde/histidinol dehydrogenaseInterproscan
IPR002872DomainProline dehydrogenase domainInterproscan
IPR016163Homologous_superfamilyAldehyde dehydrogenase, C-terminalInterproscan
IPR050485FamilyProline metabolism enzymeInterproscan
IPR029510Conserved_siteAldehyde dehydrogenase, glutamic acid active siteInterproscan
IPR051603FamilyZinc-Containing ADH Family: Quinone Oxidoreductase/CCCRInterproscan
IPR011032Homologous_superfamilyGroES-like superfamilyInterproscan
IPR013149DomainAlcohol dehydrogenase-like, C-terminalInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR013154DomainAlcohol dehydrogenase-like, N-terminalInterproscan
IPR020843DomainPolyketide synthase, enoylreductase domainInterproscan
IPR036517Homologous_superfamilyFF domain superfamilyInterproscan
IPR001202DomainWW domainInterproscan
IPR045148FamilyTranscription elongation regulator 1-likeInterproscan
IPR036020Homologous_superfamilyWW domain superfamilyInterproscan
IPR002713DomainFF domainInterproscan
IPR027079FamilyTFIIH subunit Tfb1/GTF2H1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13604DC12-RELATEDInterproscan
PTHR30481DNA ADENINE METHYLASEInterproscan
PTHR42862DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATEDInterproscan
PTHR44154QUINONE OXIDOREDUCTASEInterproscan
PTHR15377TRANSCRIPTION ELONGATION REGULATOR 1Interproscan
PTHR12856TRANSCRIPTION INITIATION FACTOR IIH-RELATEDInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0106300Biological Processprotein-DNA covalent cross-linking repairInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0009007Molecular Functionsite-specific DNA-methyltransferase (adenine-specific) activityInterproscan
GO:0009307Biological ProcessDNA restriction-modification systemInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:1904047Molecular FunctionS-adenosyl-L-methionine bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0003842Molecular Function1-pyrroline-5-carboxylate dehydrogenase activityInterproscan
GO:0004657Molecular Functionproline dehydrogenase activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0010133Biological Processproline catabolic process to glutamateInterproscan
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0009898Cellular Componentcytoplasmic side of plasma membraneInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0003960Molecular FunctionNADPH:quinone reductase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0070402Molecular FunctionNADPH bindingInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0070063Molecular FunctionRNA polymerase bindingInterproscan
GO:0000439Cellular Componenttranscription factor TFIIH core complexInterproscan
GO:0005675Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan
GO:0070816Biological Processobsolete phosphorylation of RNA polymerase II C-terminal domainInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11586CBX3, HP1G; chromobox protein 3-Spliceosomeko03041deepkoala
Chromosome and associated proteinsko03036deepkoala

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