Detailed information of g11482.t1 in Montipora capitata

Genomic Location: Sc0000345:290189...300399
NR annotation: XP_020601545.1, ribosome biogenesis protein BMS1 homolog [Orbicella faveolata]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q14692Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens OX=9606 GN=BMS1 PE=1 SV=1
O94653Ribosome biogenesis protein bms1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bms1 PE=1 SV=2
Q08965Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BMS1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003869 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08142
all species →		AARP2CNAARP2CN (NUC121) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR012948
all species →		DomainAARP2CNInterproscan
IPR039761
all species →		FamilyRibosome biogenesis protein Bms1/Tsr1Interproscan
IPR037875
all species →		DomainRibosome biogenesis protein Bms1, N-terminalInterproscan
IPR030387
all species →		DomainBms1/Tsr1-type G domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12858
all species →		RIBOSOME BIOGENESIS PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0042254
all species →		Biological Processribosome biogenesisInterproscan
GO:0000462
all species →		Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000479
all species →		Biological Processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003924
all species →		Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →		Molecular FunctionGTP bindingInterproscan
GO:0030686
all species →		Cellular Component90S preribosomeInterproscan
GO:0034511
all species →		Molecular FunctionU3 snoRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g11482.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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