Detailed information of g1155.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: OGH00225.1, hypothetical protein A2557_05710 [Candidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_56_26]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
C4L7J8Chaperone protein HscA homolog OS=Tolumonas auensis (strain DSM 9187 / NBRC 110442 / TA 4) OX=595494 GN=hscA PE=3 SV=1
Q0HJF0Chaperone protein HscA homolog OS=Shewanella sp. (strain MR-4) OX=60480 GN=hscA PE=3 SV=1
Q0HVP0Chaperone protein HscA homolog OS=Shewanella sp. (strain MR-7) OX=60481 GN=hscA PE=3 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21056ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF04212MITMIT (microtubule interacting and transport) domainDomainInterproscan
PF00787PXPX domainDomainInterproscan
PF08265YL1_CYL1 nuclear protein C-terminal domainDomainInterproscan
PF00248Aldo_ket_redAldo/keto reductase familyDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF13912zf-C2H2_6C2H2-type zinc fingerDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF05890Ebp2Eukaryotic rRNA processing protein EBP2FamilyInterproscan
PF00012HSP70Hsp70 proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048324DomainZSWIM1/3, RNaseH-like domainInterproscan
IPR044611FamilyUbiquitin-protein ligase E3A/B/C-likeInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR001683DomainPhox homologyInterproscan
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR036181Homologous_superfamilyMIT domain superfamilyInterproscan
IPR007330DomainMIT domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR051866FamilyIntracellular Signaling and Trafficking ProteinInterproscan
IPR013272DomainVps72/YL1, C-terminalInterproscan
IPR036812Homologous_superfamilyNADP-dependent oxidoreductase domain superfamilyInterproscan
IPR023210DomainNADP-dependent oxidoreductase domainInterproscan
IPR020471FamilyAldo-keto reductaseInterproscan
IPR044479FamilyL-galactose dehydrogenase-likeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR051941FamilyBlood Group Antigen-Binding LectinInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR008610FamilyEukaryotic rRNA processingInterproscan
IPR013126FamilyHeat shock protein 70 familyInterproscan
IPR029047Homologous_superfamilyHeat shock protein 70kD, peptide-binding domain superfamilyInterproscan
IPR029048Homologous_superfamilyHeat shock protein 70kD, C-terminal domain superfamilyInterproscan
IPR018181Conserved_siteHeat shock protein 70, conserved siteInterproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45700UBIQUITIN-PROTEIN LIGASE E3CInterproscan
PTHR15508RIBOSOMAL PROTEIN S6 KINASEInterproscan
PTHR42686GH17980P-RELATEDInterproscan
PTHR24408ZINC FINGER PROTEINInterproscan
PTHR45713FTP DOMAIN-CONTAINING PROTEINInterproscan
PTHR13028RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATEDInterproscan
PTHR19375HEAT SHOCK PROTEIN 70KDAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0010349Molecular FunctionL-galactose dehydrogenase activityInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0034399Cellular Componentnuclear peripheryInterproscan
GO:0042273Biological Processribosomal large subunit biogenesisInterproscan
GO:0140662Molecular FunctionATP-dependent protein folding chaperoneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20839RSKL; ribosomal protein S6 kinase-like-Chaperones and folding catalystsko03110deepkoala
Protein kinasesko01001deepkoala

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