Detailed information of g1156.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: PCI30323.1, Fe-S cluster assembly scaffold IscU [SAR324 cluster bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q57074Iron-sulfur cluster assembly scaffold protein IscU OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=iscU PE=1 SV=2
P0ACD6Iron-sulfur cluster assembly scaffold protein IscU OS=Escherichia coli O157:H7 OX=83334 GN=iscU PE=1 SV=1
P0ACD5Iron-sulfur cluster assembly scaffold protein IscU OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=iscU PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF01592NifU_NNifU-like N terminal domainFamilyInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00180Iso_dhIsocitrate/isopropylmalate dehydrogenaseDomainInterproscan
PF15092UPF0728Uncharacterised protein family UPF0728FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR002871DomainNIF system FeS cluster assembly, NifU, N-terminalInterproscan
IPR011339FamilyIron-sulfur cluster assembly scaffold protein IscUInterproscan
IPR050145FamilyCalmodulin and Centrin Calcium-Binding FamiliesInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR004429FamilyIsopropylmalate dehydrogenaseInterproscan
IPR024084DomainIsopropylmalate dehydrogenase-like domainInterproscan
IPR019818Conserved_siteIsocitrate/isopropylmalate dehydrogenase, conserved siteInterproscan
IPR027885FamilyUncharacterised protein family UPF0728Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR10093IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOGInterproscan
PTHR23050CALCIUM BINDING PROTEINInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR46297ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEINInterproscan
PTHR429793-ISOPROPYLMALATE DEHYDROGENASEInterproscan
PTHR28448UPF0728 PROTEIN C10ORF53Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016226Biological Processiron-sulfur cluster assemblyInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006879Biological Processintracellular iron ion homeostasisInterproscan
GO:0008198Molecular Functionferrous iron bindingInterproscan
GO:0051537Molecular Function2 iron, 2 sulfur cluster bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0001227Molecular FunctionDNA-binding transcription repressor activity, RNA polymerase II-specificInterproscan
GO:0003862Molecular Function3-isopropylmalate dehydrogenase activityInterproscan
GO:0009098Biological ProcessL-leucine biosynthetic processInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00052leuB, IMDH; 3-isopropylmalate dehydrogenaseEC:1.1.1.85
Focal adhesionko04510deepkoala
Valine, leucine and isoleucine biosynthesisko00290deepkoala

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