Detailed information of g1157.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: OGH00229.1, IscS subfamily cysteine desulfurase [Candidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_56_26]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A7H804Cysteine desulfurase IscS OS=Anaeromyxobacter sp. (strain Fw109-5) OX=404589 GN=iscS PE=3 SV=1
Q2INI7Cysteine desulfurase IscS OS=Anaeromyxobacter dehalogenans (strain 2CP-C) OX=290397 GN=iscS PE=3 SV=1
B4UCP2Cysteine desulfurase IscS OS=Anaeromyxobacter sp. (strain K) OX=447217 GN=iscS PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03050DDE_Tnp_IS66Transposase IS66 family FamilyInterproscan
PF13005zf-IS66zinc-finger binding domain of transposase IS66 DomainInterproscan
PF13817DDE_Tnp_IS66_CIS66 C-terminal elementFamilyInterproscan
PF13007LZ_Tnp_IS66Transposase C of IS166 homeodomainFamilyInterproscan
PF01118Semialdhyde_dhSemialdehyde dehydrogenase, NAD binding domainDomainInterproscan
PF02774Semialdhyde_dhCSemialdehyde dehydrogenase, dimerisation domainDomainInterproscan
PF00266Aminotran_5Aminotransferase class-VDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF20146NRFNose resistant-to-fluoxetine protein, N-terminal domainDomainInterproscan
PF01431Peptidase_M13Peptidase family M13FamilyInterproscan
PF04880NUDE_CNUDE protein, C-terminal conserved regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR052344FamilyTransposase-related proteinInterproscan
IPR004291DomainTransposase IS66, central domainInterproscan
IPR024474DomainTransposase IS66, zinc-finger binding domain ofInterproscan
IPR039552DomainTransposase IS66, C-terminalInterproscan
IPR024463DomainTransposase TnpC, homeodomainInterproscan
IPR000534DomainSemialdehyde dehydrogenase, NAD-bindingInterproscan
IPR005986FamilyAspartate-semialdehyde dehydrogenase, beta-typeInterproscan
IPR012080FamilyAspartate-semialdehyde dehydrogenaseInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR012280DomainSemialdehyde dehydrogenase, dimerisation domainInterproscan
IPR020578Binding_siteAminotransferase class-V, pyridoxal-phosphate binding siteInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR000192DomainAminotransferase class V domainInterproscan
IPR016454FamilyCysteine desulfuraseInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR010240FamilyCysteine desulfurase IscSInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR006621DomainNose resistant-to-fluoxetine protein, N-terminalInterproscan
IPR052728FamilyOxygen and lipid transport regulatorInterproscan
IPR000718FamilyPeptidase M13Interproscan
IPR042089Homologous_superfamilyPeptidase M13, domain 2Interproscan
IPR018497DomainPeptidase M13, C-terminal domainInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR033494FamilyNUDE familyInterproscan
IPR006964DomainNUDE domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR33678BLL1576 PROTEINInterproscan
PTHR46278DEHYDROGENASE, PUTATIVE-RELATEDInterproscan
PTHR11601CYSTEINE DESULFURYLASE FAMILY MEMBERInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46077E3 UBIQUITIN-PROTEIN LIGASE TOPORSInterproscan
PTHR11161O-ACYLTRANSFERASEInterproscan
PTHR11733ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATEDInterproscan
PTHR10921NUCLEAR DISTRIBUTION PROTEIN NUDE HOMOLOG 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0004073Molecular Functionaspartate-semialdehyde dehydrogenase activityInterproscan
GO:0009086Biological Processmethionine biosynthetic processInterproscan
GO:0009088Biological Processthreonine biosynthetic processInterproscan
GO:0009089Biological Processlysine biosynthetic process via diaminopimelateInterproscan
GO:0009097Biological Processisoleucine biosynthetic processInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0008652Biological Processamino acid biosynthetic processInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0031071Molecular Functioncysteine desulfurase activityInterproscan
GO:0044571Biological Process[2Fe-2S] cluster assemblyInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0006513Biological Processprotein monoubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0016485Biological Processprotein processingInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0000132Biological Processestablishment of mitotic spindle orientationInterproscan
GO:0000776Cellular ComponentkinetochoreInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0005871Cellular Componentkinesin complexInterproscan
GO:0007020Biological Processmicrotubule nucleationInterproscan
GO:0007059Biological Processchromosome segregationInterproscan
GO:0007100Biological Processmitotic centrosome separationInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0047496Biological Processvesicle transport along microtubuleInterproscan
GO:0051303Biological Processestablishment of chromosome localizationInterproscan
GO:0051642Biological Processcentrosome localizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07484K07484; transposase-Prokaryotic defense systemko02048deepkoala
Cilium and associated proteinsko03037deepkoala
Chromosome and associated proteinsko03036deepkoala
Replication and repair-deepkoala

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