Detailed information of g1158.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: PCI22848.1, 1-deoxy-D-xylulose-5-phosphate synthase, partial [SAR324 cluster bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8DL741-deoxy-D-xylulose-5-phosphate synthase OS=Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1) OX=197221 GN=dxs PE=3 SV=2
B0C8J31-deoxy-D-xylulose-5-phosphate synthase OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=dxs PE=3 SV=1
B0JL881-deoxy-D-xylulose-5-phosphate synthase OS=Microcystis aeruginosa (strain NIES-843 / IAM M-2473) OX=449447 GN=dxs PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF02779Transket_pyrTransketolase, pyrimidine binding domainDomainInterproscan
PF02780Transketolase_CTransketolase, C-terminal domainDomainInterproscan
PF01494FAD_binding_3FAD binding domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001734FamilySodium/solute symporterInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR020635DomainTyrosine-protein kinase, catalytic domainInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR050122FamilyReceptor Tyrosine KinaseInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR008266Active_siteTyrosine-protein kinase, active siteInterproscan
IPR051098FamilyNeuronal Differentiation E-box Binding Transcription FactorsInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR009014Homologous_superfamilyTransketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IIInterproscan
IPR005475DomainTransketolase-like, pyrimidine-binding domainInterproscan
IPR020826Binding_siteTransketolase binding siteInterproscan
IPR005477FamilyDeoxyxylulose-5-phosphate synthaseInterproscan
IPR029061Homologous_superfamilyThiamin diphosphate-binding foldInterproscan
IPR033248DomainTransketolase, C-terminal domainInterproscan
IPR002938DomainFAD-binding domainInterproscan
IPR010971FamilyUbiquinone biosynthesis hydroxylase UbiH/COQ6Interproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR051205FamilyUbiquinone biosynthesis monooxygenase UbiH/COQ6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11819SOLUTE CARRIER FAMILY 5Interproscan
PTHR36191ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR24416TYROSINE-PROTEIN KINASE RECEPTORInterproscan
PTHR11793BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTORInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR433221-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATEDInterproscan
PTHR43876UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005412Molecular FunctionD-glucose:sodium symporter activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0004713Molecular Functionprotein tyrosine kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0004714Molecular Functiontransmembrane receptor protein tyrosine kinase activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007169Biological Processcell surface receptor protein tyrosine kinase signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0033674Biological Processpositive regulation of kinase activityInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008661Molecular Function1-deoxy-D-xylulose-5-phosphate synthase activityInterproscan
GO:0016114Biological Processterpenoid biosynthetic processInterproscan
GO:0016744Molecular Functiontransketolase or transaldolase activityInterproscan
GO:0019288Biological Processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathwayInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan
GO:0006744Biological Processubiquinone biosynthetic processInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15603TCF4_12; transcription factor 4/12-Transcription factorsko03000deepkoala

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