Gene detail

Detailed information of g11583.t1 in Tripedalia maipoensis

Genomic Location: scaffold_9:6015413...6065795
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g11583.t1

ATGGACAACTTCGAGGAGGCTAAAGATTACATGTCCAAGCGGGAAATTCCACAACTGTTCGAGAGTCTCATGACTGGTTTGATGTACAACAAGCCTGCAGATCACATTCAGTTCCTGGAGACATGTTTAGATAGAGCAAAAAAGGAAGAGAAAATTAAATGGAACACATTTCTAGGTCCTTTACCGCCTATACCACAGAAAGACAAACCAATCAAATCTGAAAGTGTAGCACAAGAGCTGAAGGATGACAATCAAGTGGACCATTATCCAGAAGAAGAATCTGGATTTCCTAAGGTTCAGCAGCCTCTACCACCAATTGCAAAATCACCTCCAGTTTTACAGGAGGATGTAGAGCACCCCAATGGTGATGTGATCAGCACTCCTGATGAGGAATCAGTTAAGCCAGAGGCTACGTGTAAGGATCAACTTGTTCTGGAAACAGCTGGAGAAGGAAAAACTGAGGAGAAAAATGATAATGATGATAATAATAATGAAATAGAACCAGAGAATCAAAATAACACAGAAATAGAACAAGATGAAATACCTTCCTTAGAGGTTGACTTAACGAATGAGAATGCCAGTGAAGATTCAATCACACAACCAGTCATATTTGTATTAGGTGGTCCTGGCTCAGGCAAAGGAACCCAGTGTGCCAAGATAGTGGAACAGTTTAAGTTGATTCACCTCTCAGCTGGTGAACTTCTGAGGGCTGAAATGAATAAGGCTGAGGGGTCAGAATATGGGCCTCTAATACAAGAATGTATAAAGGAAGGTGCTCTGGTGCCACAGGAGATAACTATACAACTTCTGAAAAATGCTATGCTCGCCCATAAAGATGCAAAAGGATTCCTGGTCGATGGATTTCCTAGAGAAATCGGGCAGGGAATGGAGTTTGAAGAGAAGGTATGCAAAAGTGCAGCCCTCTTAACATTTTCGTGTGACGACGACGTTCTTGTGGCGCGACTATTAGAACGTGGGAAGACTAGTGGGAGAACAGATGATAATGAAGATACCATCAAACTGAGGCTGAAAACGTTCCACGAAAAGACAGAACCAGTCCTCGAGCACTACATGGAAAAAGTGACAGACATCGATGCCAGTCGTACTGTAGAAGAAATCTACAAGGACGTTGAAAAATTCATGGAGCACCTCCTAGGCTTTAATGAGCTCTCAGAGCAGATCGATAGTTTGATGGCTGAAATGAAAGAGAATCCTATCAAGCACGAAGCCGAAGAGGAAAAAACCGAACGATCGGGGACCGCGAACCAGTACCCTGAAATAGAGGACGAGATTATTCCATCAGAAGCCTTTTTGAGCGGTGACAAAGGTAACGTCGACCAGTGCTCTGATATGATGATCAATGAAACAAACTTTGGAGATGAAAAAGACTCCGCGGGGGATGCTTTCAGCGGAATTCCACCCGACCATGATGCAGAATCAAGGCTTATTGAAGAGGATGGCGTGGTGGCAGTTGAAGTGTGCCTGGATGGTGACCTTGGTAATGTGGACCACGACGTTAAAGTCGAGACGAGCGAGAAGAGGATTATTTATGTAATAGGCCCACTCGATTCAGAGATGACTGAACTATGTTCTCGTCTCGCTGGAAAGCTTGGATTTGAACATATCAGTATCAGTAAAGAGTTGATAAGGGATTCAGCTGGCTCACCAGAGATCGCCGAGAATAAAATTGGTAACCCTATCAACAAACTGAAGGAGGCTATTCTTGCCAGTGATCCGTCAAAGCCCGGATTTATTATTGAAGGCCTACCACAGGACGTGAAACAAGGAGTGTTATTGGAAGTGGAGATTAAGTCATGTGATCTTCTCGTTCATCTGGAAAGTCCAACTCGTGACAAGAGGCAAAACGAGGCAGAAGGGAGCACAGAAGAGGTTACCTCTGTCATTGCAGAGGAGCGAGTGCTTGAATCACAGCGGGAAATGGCATTAGTAGCCAACCACTTTGAAGCTCAGGGGAAACTAGCCGTGGTTTCATCGCTCGGAAGCCGAGAAGAAGTATTTGCAAAGCTGCTACAGGCTGTGGAAGAGAGGCTTGTTCCATCAACATCACCTGCAATGAGTAAAGAACTGGAACACGCTAACATCATTTTCGTACTTGGTGGTCCTGGTTCTGGCAAGGGTACGCAGTGCGCCAAGATAGTAGAGAAGTATGGTTTCTGCCACTTATCAACGGGAGATCTCCTGCGCGAAGAAGTCAACTCGGGCTCTGAAAGGGCGAAGAAGCTGAAAGACATCATGGAACGAGGAGAACTAGTATCCCAGGAAATCATCTTACAACTTCTGAAAGACGCTATGGTCAAGCGAAAGGACTGTAAGGGCTTTCTCATCGATGGATTCCCACGTGATGTGCCGCAAGGAGATCTCTTCGAGAAAACGGTCGGCACCTGCAAGTTTGTCCTCTATTTTGATTGTTCGAATGAAGTCATGGTGGAGCGGCTATTGGGACGAGCAAAGACCAGCGGTCGGGTTGACGATAACGAGGAGACAATCAAAAAGAGGCTGAAAACTTTCGAAGAACAAACCCTACCAGTCCTTGAGAAGTATGGGCCGCAAGATAAAGTGCGAAAGGTTAATGCCGAACGTGGCGTGGACGACATTTTTGCAGATGTATGCTCTGCCATTGACAAAATGTAA

Transcript

g11583.t1

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006307 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00406 all species →	ADK	Adenylate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000850 all species →	Family	Adenylate kinase/UMP-CMP kinase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR033690 all species →	Conserved_site	Adenylate kinase, conserved site	Interproscan
IPR006267 all species →	Family	Adenylate kinase, isozyme 1/5	Interproscan
IPR006266 all species →	Family	UMP-CMP kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23359 all species →	NUCLEOTIDE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006139 all species →	Biological Process	nucleobase-containing compound metabolic process	Interproscan
GO:0019205 all species →	Molecular Function	nucleobase-containing compound kinase activity	Interproscan
GO:0004017 all species →	Molecular Function	adenylate kinase activity	Interproscan
GO:0004127 all species →	Molecular Function	(d)CMP kinase activity	Interproscan
GO:0004550 all species →	Molecular Function	nucleoside diphosphate kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006165 all species →	Biological Process	obsolete nucleoside diphosphate phosphorylation	Interproscan
GO:0046034 all species →	Biological Process	ATP metabolic process	Interproscan
GO:0006207 all species →	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan
GO:0006221 all species →	Biological Process	pyrimidine nucleotide biosynthetic process	Interproscan
GO:0009041 all species →	Molecular Function	UMP/dUMP kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g11583.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.