Gene detail

Detailed information of g11608.t1 in Acropora digitifera

Genomic Location: chr5Alt:21588749...21615093
NR annotation: XP_044176930.1, uncharacterized protein LOC114955381 isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g11608.t1

ATGGCCGCGAAAAGTTCCGCTTACGCATTTATCACGCAGAAGGTTATCTGCCTCCTCTTTCTTCAGTCGGGATTGTCACTTAGTCAAGCGACTTCGTCATCAAGAGTTAGCGGAAGCATTACAATTCACCCTACTGCCACTGGCAATCATTCCACCATGACATCTGGCTCCTCGAACACAACTTCCGGGCCATTGAACGCAACCACTTCTAGTTCATCCAGCAATTTCAGTGCTACAATTAGTACGGTTATGCCAAGCCCATCAGCATCCTCAGTTGCTCCTGGCCAGACTAACAGTGTACAGGATCAACGGCCAACTGATGAAGAAATTGAACAGACGTTTCAATCTGAAGTATTTAAGCTCAACCATGAATTTTCTTCGGAGATCGATCCCAAGAGAGATGAACCGATTGACGTTGATGTGATCGACTCATTCACGAAGATGATGACTTCAGGTTGGAATTTGTTGTTTCGATACAACGCGTCGATTTACGACGAAACCGTCGACTACTTCAACGTCACGGAAAGCTTGGTGATAATCATGAGAAAGTACTACTGCCTTGAGGAAAGAGAGGCAGTTCTTCCTGATCGCTCCAACAAGTCTAGACGAAAAGAATTAGGAAAGGTCACTGATACTGTTGCGCTGAAATTTGACTGCCCAAGAATAATCAGTAATGATAATCGTCGTCAGAGGTCCCATTCAAGGAAAAGACGCGAGGTCGAGATGGAAATCACCATGGAGATAAATGCTGACGATGATCTTGAAGTGGATGAAGACTATCAGTTATATCAATACCACCGCTCACGATTGAGGAGAGACGCCGCTCAACATCAACAGCAACAATGCGGACCACTCAAATGCAATGTGAAACGCCTTGACAGTAACTTGAAAATCATAGGCAGATGGTCTTCTAATCTTACAAATTTGACATCACCAGAGTCCACAAACTTAACAAAGGAGTTAAAAGATGCGCTTCATCACGTGCTCGGCGCTACTTTTAAAGTGGAAGACATTGATATTTTAAAATATGAAAAAAGCAGCCAAGGTAATCAAGATGATGATGTGACAGTCAGTTTTTACCTGGATGTGCATGATGTACAAAGGGAAAACGTTACCACAGCCCGCGTAACCAACGTCTTAAAAAAAGCAGCTACAGATAACAGCTTTCTGCCTCTAGAAGTGAAATTCGTTTCATTGAAATATGTCGTTGTTGTCAATGGTAATTACAGTGAGTGGATAGGATGGGGAAAATGTGATAGCAATTACAATATTAGAAGAAATCGGACATGCGTGGGCTCTGAAAACGGAGGACAGTGTCATGGACACGCATCGGAAATGAAGAAATGCGCTTCAGATGGGGATATGTGCTATAAACATTGCGTTTTCAATGAGACTAAAGGCGGAAGCATCAGTTCGCCCCTTTTTCCTAAAAACTATACAACAAATGTGACTTGTGTTTGGTTCCTCTTGGCACCTGTTAACCACACCGTCAAATTTTTCCTGAAGGAATTCGCTTTGGAGGAGGACAAGAAATGTTTTTACGATTACGTAGAATTTTATGACGGTGACAACGTTACAAGCGAAGATCATCTGATTGGCAGGAGAATGTGTGGAAATCATAGCCAGACCACCATTAATTCAACAGGCCAGACGCTGACGATTGTATTTAAATCTGACAAGAGCGTAACAAACAAAGGCTTTTCTGGTGTATGGCATTCAGAGGAAATCGAGGAGAAAGGGTTTGTTCCGCAATATGTAACTGCTTTGACTATGATCTATAGTCCCAATGTTAATGATACCCATTATCCTTTGGGAACCGCAACCACATGTTCTTCTGAAAGCATGACTATGGACGAAAACTGCAAATTTAATACAAAGGTTTACATCATCTCACGATTAATAAGCGCCCAAATGGGACGTCGCCTTCCACTGGCTGGAGAAAACAGGATCATTATTAACTTTGAACATATTATGAATGAGAATCTCTTCCCAGCAATGTACAGTGGACAAAAATATTGCGTTTACTGGAACAGTAAAGCAAAGGAGAAACAAGCCAATGGTGCTAAAAATTCGTTTCCAACTGAAGATACGGGTTCCTGGTCAAGAACGGGCTGCTCCCTCGTTTCAACCAACTTGACCCACTCGTCTTGCGCTTGTGACCACGAAGGCCTTTTTGCCTTACTTGGACAAGAAAAGACTCATTCTGGTAAACTGAAGTTGTTGACGAATACTTACATTGGAATTGGAATTTCATATTTCATCCTCATTCTAGCTATTATACATATTGTCTGGAAAATTGAAATCCACGGAGGTGAAGTCATGCGCATTAACATGTGTGCCGCCATCATTTCCATGCAGACCTTTTTCCTTATCGGTGCGCATGTCAAAGCCCAACAGACCCTGTGTGGTTTTCTTGCATTCGCAATTTATTTCTCCGTCCTGGCTGAATTTTCTTGGCTTCTGCTTCATGGTTTGAGAATCCACGGGAAAATCAAGAAAATTTTTGCCTCAAATCTCAATATTGAGATTGTGTACGTCGTTATCGGCTGGGGATTGCCATTGCTTCTTGCTCTTCTTGCGATTGGGGTGAAGATTGATTCAGAAAGTAAGGACAAAGTATGTTGGGAGGCCGCTGCAGGTAGCTCCATGCTGGGATATGCCGCACCTCTGATTCTCATAAGTTTGTTTAATGGTGCTGTCTTAGTAAAGCTTCTGATTCCAACTCAGGATGTGAAAGACGCCTATGACCACAGAGAACTGAGGTTTCGCGTGTTCAAGGACTTTGTATTTTTGCTGTGTTTCGCTCTGACGTGCACCTTTGCTTACCAAGCAGTTGAAGAGAAAAGGTTTTTTGAGCAGTATTTGTTGACAGCTTTCGTGATCATGCAGGCTGTCGCCATGTTTGTGTTTGGTAGAGAGGGTCGAAAAGATTTCGTTAAGCGAGCTATGGAACCCAAACCGGAACCGGAAACAGCGAAAGAAGAACCGGAAGAAAACATTTACGAAAACATTTACGAAAACATTCAGCCGGAAACAAAGTCTTCCAAGGAGACCGACCTTGGAGAGGGGTCACCAAAGAAGAGACCTCGTAAAAGAGCCTCAAACAAACAAGCCGAGAAGATCACCGTTGCTACCTTGAAAAACCTCAACATTTACAAAGAAGGTGGCCAATACGTCATCGAGGCTTAA

Transcript

chr5Alt.g11608.t1

GGTTATTATTAATAATTAATGATCTATTGCTCCAGGGTCAATTTACGCATAGCAGTTTGTTACAACATCGAGACGGCTTTCTTGTCGGCAATGGATTTTGAGCTGTGAAGTCGGTGTCTCTAGATTTAAAATCGATCACCTTCGAGTCCGTTGACCACATTCGTAGTTCTTGGCTGGGTTTAAATAGACAAGTTTTGTGGTTAACTTCTCAACATAACATGGCCGCGAAAAGTTCCGCTTACGCATTTATCACGCAGAAGGTTATCTGCCTCCTCTTTCTTCAGTCGGGATTGTCACTTAGTCAAGCGACTTCGTCATCAAGAGTTAGCGGAAGCATTACAATTCACCCTACTGCCACTGGCAATCATTCCACCATGACATCTGGCTCCTCGAACACAACTTCCGGGCCATTGAACGCAACCACTTCTAGTTCATCCAGCAATTTCAGTGCTACAATTAGTACGGTTATGCCAAGCCCATCAGCATCCTCAGTTGCTCCTGGCCAGACTAACAGTGTACAGGATCAACGGCCAACTGATGAAGAAATTGAACAGACGTTTCAATCTGAAGTATTTAAGCTCAACCATGAATTTTCTTCGGAGATCGATCCCAAGAGAGATGAACCGATTGACGTTGATGTGATCGACTCATTCACGAAGATGATGACTTCAGGTTGGAATTTGTTGTTTCGATACAACGCGTCGATTTACGACGAAACCGTCGACTACTTCAACGTCACGGAAAGCTTGGTGATAATCATGAGAAAGTACTACTGCCTTGAGGAAAGAGAGGCAGTTCTTCCTGATCGCTCCAACAAGTCTAGACGAAAAGAATTAGGAAAGGTCACTGATACTGTTGCGCTGAAATTTGACTGCCCAAGAATAATCAGTAATGATAATCGTCGTCAGAGGTCCCATTCAAGGAAAAGACGCGAGGTCGAGATGGAAATCACCATGGAGATAAATGCTGACGATGATCTTGAAGTGGATGAAGACTATCAGTTATATCAATACCACCGCTCACGATTGAGGAGAGACGCCGCTCAACATCAACAGCAACAATGCGGACCACTCAAATGCAATGTGAAACGCCTTGACAGTAACTTGAAAATCATAGGCAGATGGTCTTCTAATCTTACAAATTTGACATCACCAGAGTCCACAAACTTAACAAAGGAGTTAAAAGATGCGCTTCATCACGTGCTCGGCGCTACTTTTAAAGTGGAAGACATTGATATTTTAAAATATGAAAAAAGCAGCCAAGGTAATCAAGATGATGATGTGACAGTCAGTTTTTACCTGGATGTGCATGATGTACAAAGGGAAAACGTTACCACAGCCCGCGTAACCAACGTCTTAAAAAAAGCAGCTACAGATAACAGCTTTCTGCCTCTAGAAGTGAAATTCGTTTCATTGAAATATGTCGTTGTTGTCAATGGTAATTACAGTGAGTGGATAGGATGGGGAAAATGTGATAGCAATTACAATATTAGAAGAAATCGGACATGCGTGGGCTCTGAAAACGGAGGACAGTGTCATGGACACGCATCGGAAATGAAGAAATGCGCTTCAGATGGGGATATGTGCTATAAACATTGCGTTTTCAATGAGACTAAAGGCGGAAGCATCAGTTCGCCCCTTTTTCCTAAAAACTATACAACAAATGTGACTTGTGTTTGGTTCCTCTTGGCACCTGTTAACCACACCGTCAAATTTTTCCTGAAGGAATTCGCTTTGGAGGAGGACAAGAAATGTTTTTACGATTACGTAGAATTTTATGACGGTGACAACGTTACAAGCGAAGATCATCTGATTGGCAGGAGAATGTGTGGAAATCATAGCCAGACCACCATTAATTCAACAGGCCAGACGCTGACGATTGTATTTAAATCTGACAAGAGCGTAACAAACAAAGGCTTTTCTGGTGTATGGCATTCAGAGGAAATCGAGGAGAAAGGGTTTGTTCCGCAATATGTAACTGCTTTGACTATGATCTATAGTCCCAATGTTAATGATACCCATTATCCTTTGGGAACCGCAACCACATGTTCTTCTGAAAGCATGACTATGGACGAAAACTGCAAATTTAATACAAAGGTTTACATCATCTCACGATTAATAAGCGCCCAAATGGGACGTCGCCTTCCACTGGCTGGAGAAAACAGGATCATTATTAACTTTGAACATATTATGAATGAGAATCTCTTCCCAGCAATGTACAGTGGACAAAAATATTGCGTTTACTGGAACAGTAAAGCAAAGGAGAAACAAGCCAATGGTGCTAAAAATTCGTTTCCAACTGAAGATACGGGTTCCTGGTCAAGAACGGGCTGCTCCCTCGTTTCAACCAACTTGACCCACTCGTCTTGCGCTTGTGACCACGAAGGCCTTTTTGCCTTACTTGGACAAGAAAAGACTCATTCTGGTAAACTGAAGTTGTTGACGAATACTTACATTGGAATTGGAATTTCATATTTCATCCTCATTCTAGCTATTATACATATTGTCTGGAAAATTGAAATCCACGGAGGTGAAGTCATGCGCATTAACATGTGTGCCGCCATCATTTCCATGCAGACCTTTTTCCTTATCGGTGCGCATGTCAAAGCCCAACAGACCCTGTGTGGTTTTCTTGCATTCGCAATTTATTTCTCCGTCCTGGCTGAATTTTCTTGGCTTCTGCTTCATGGTTTGAGAATCCACGGGAAAATCAAGAAAATTTTTGCCTCAAATCTCAATATTGAGATTGTGTACGTCGTTATCGGCTGGGGATTGCCATTGCTTCTTGCTCTTCTTGCGATTGGGGTGAAGATTGATTCAGAAAGTAAGGACAAAGTATGTTGGGAGGCCGCTGCAGGTAGCTCCATGCTGGGATATGCCGCACCTCTGATTCTCATAAGTTTGTTTAATGGTGCTGTCTTAGTAAAGCTTCTGATTCCAACTCAGGATGTGAAAGACGCCTATGACCACAGAGAACTGAGGTTTCGCGTGTTCAAGGACTTTGTATTTTTGCTGTGTTTCGCTCTGACGTGCACCTTTGCTTACCAAGCAGTTGAAGAGAAAAGGTTTTTTGAGCAGTATTTGTTGACAGCTTTCGTGATCATGCAGGCTGTCGCCATGTTTGTGTTTGGTAGAGAGGGTCGAAAAGATTTCGTTAAGCGAGCTATGGAACCCAAACCGGAACCGGAAACAGCGAAAGAAGAACCGGAAGAAAACATTTACGAAAACATTTACGAAAACATTCAGCCGGAAACAAAGTCTTCCAAGGAGACCGACCTTGGAGAGGGGTCACCAAAGAAGAGACCTCGTAAAAGAGCCTCAAACAAACAAGCCGAGAAGATCACCGTTGCTACCTTGAAAAACCTCAACATTTACAAAGAAGGTGGCCAATACGTCATCGAGGCTTAAAACTAATCAGTGACCGTCTTTTAGTGTCGTTATAACCTTATG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O57382	Tolloid-like protein 2 OS=Xenopus laevis OX=8355 GN=tll2 PE=2 SV=1
Q9Y6L7	Tolloid-like protein 2 OS=Homo sapiens OX=9606 GN=TLL2 PE=1 SV=1
Q9WVM6	Tolloid-like protein 2 OS=Mus musculus OX=10090 GN=Tll2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF01825 all species →	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF00431 all species →	CUB	CUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR000203 all species →	Conserved_site	GPS motif	Interproscan
IPR000859 all species →	Domain	CUB domain	Interproscan
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR035914 all species →	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011 all species →	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007189 all species →	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g11608.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.