Detailed information of g1164.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_085801514.1, TRAP transporter substrate-binding protein [Roseovarius aestuarii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8VDM6Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 PE=1 SV=1
Q9BUJ2Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Homo sapiens OX=9606 GN=HNRNPUL1 PE=1 SV=2
Q00PI9Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Mus musculus OX=10090 GN=Hnrnpul2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03480DctPBacterial extracellular solute-binding protein, family 7FamilyInterproscan
PF08030NAD_binding_6Ferric reductase NAD binding domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF10256Erf4Golgin subfamily A member 7/ERF4 familyDomainInterproscan
PF00622SPRYSPRY domainFamilyInterproscan
PF13671AAA_33AAA domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR018389FamilyTRAP transporter solute receptor DctPInterproscan
IPR038404Homologous_superfamilyTRAP transporter solute receptor DctP superfamilyInterproscan
IPR039261Homologous_superfamilyFerredoxin-NADP reductase (FNR), nucleotide-binding domainInterproscan
IPR000778FamilyCytochrome b245, heavy chainInterproscan
IPR013121DomainFerric reductase, NAD binding domainInterproscan
IPR050369FamilyRespiratory burst oxidase/Ferric reductaseInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR039808FamilyCadherinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR019383DomainGolgin subfamily A member 7/ERF4Interproscan
IPR051371FamilyRas-specific palmitoyltransferase complexInterproscan
IPR003877DomainSPRY domainInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR035778DomainHeterogeneous nuclear ribonucleoprotein U, SPRY domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33376-Interproscan
PTHR11972NADPH OXIDASEInterproscan
PTHR24027CADHERIN-23Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR13254GOLGI AUTOANTIGEN, GOLGIN SUBFAMILY A, 7Interproscan
PTHR12381HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBERInterproscan
PTHR46601ULP_PROTEASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006952Biological Processdefense responseInterproscan
GO:0016175Molecular Functionsuperoxide-generating NAD(P)H oxidase activityInterproscan
GO:0042554Biological Processsuperoxide anion generationInterproscan
GO:0043020Cellular ComponentNADPH oxidase complexInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0002178Cellular Componentpalmitoyltransferase complexInterproscan
GO:0006612Biological Processprotein targeting to membraneInterproscan
GO:0018230Biological Processpeptidyl-L-cysteine S-palmitoylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25777GOLGA7, GCP16; golgin subfamily A member 7-Transportersko02000deepkoala
Membrane traffickingko04131deepkoala

TOP