Detailed information of g1166.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_152140688.1, Glu/Leu/Phe/Val dehydrogenase [Amylibacter sp. SFDW26]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q53199Probable glutamate dehydrogenase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a01340 PE=3 SV=1
Q54KB7Glutamate dehydrogenase, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=gluD PE=1 SV=1
P54385Glutamate dehydrogenase, mitochondrial OS=Drosophila melanogaster OX=7227 GN=Gdh PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02812ELFV_dehydrog_NGlu/Leu/Phe/Val dehydrogenase, dimerisation domainDomainInterproscan
PF00208ELFV_dehydrogGlutamate/Leucine/Phenylalanine/Valine dehydrogenaseDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF13676TIR_2TIR domainDomainInterproscan
PF13854Kelch_5Kelch motifRepeatInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00476DNA_pol_ADNA polymerase family AFamilyInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF20470HTH_61Helix-turn-helix domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF21099POLQ_helicalDNA_pol_Q helicase like region helical domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046346Homologous_superfamilyAminoacid dehydrogenase-like, N-terminal domain superfamilyInterproscan
IPR033922DomainNAD(P) binding domain of glutamate dehydrogenaseInterproscan
IPR006096DomainGlutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminalInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR006095FamilyGlutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenaseInterproscan
IPR033524Active_siteLeu/Phe/Val dehydrogenases active siteInterproscan
IPR006097DomainGlutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domainInterproscan
IPR014362FamilyGlutamate dehydrogenaseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR035897Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR017241FamilyToll-like receptorInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR000157DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036610Homologous_superfamilyPEBP-like superfamilyInterproscan
IPR035810FamilyPhosphatidylethanolamine-binding protein, eukaryoticInterproscan
IPR001098DomainDNA-directed DNA polymerase, family A, palm domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR019760Conserved_siteDNA-directed DNA polymerase, family A, conserved siteInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR002298FamilyDNA polymerase AInterproscan
IPR046931DomainDNA polymerase theta-like, helix-turn-helix domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR048960DomainPOLQ-like, helical domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR050374FamilyRRT5/SRSF/Splicing Factor SRInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11606GLUTAMATE DEHYDROGENASEInterproscan
PTHR47272DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR24365TOLL-LIKE RECEPTORInterproscan
PTHR46093ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5Interproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11362PHOSPHATIDYLETHANOLAMINE-BINDING PROTEINInterproscan
PTHR10133DNA POLYMERASE IInterproscan
PTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016639Molecular Functionoxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptorInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0004352Molecular Functionglutamate dehydrogenase (NAD+) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006538Biological Processglutamate catabolic processInterproscan
GO:0002224Biological Processtoll-like receptor signaling pathwayInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006954Biological Processinflammatory responseInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005762Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0097681Biological Processdouble-strand break repair via alternative nonhomologous end joiningInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24992MYEF2; myelin expression factor 2-Exosomeko04147deepkoala
DNA repair and recombination proteinsko03400deepkoala
Transcription factorsko03000deepkoala

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