Gene detail

Detailed information of g11685.t1.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: KAJ7336072.1, Polynucleotide 5'-hydroxyl-kinase nol9 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5SY16	Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Homo sapiens OX=9606 GN=NOL9 PE=1 SV=1
E1BPN0	Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Bos taurus OX=9913 GN=NOL9 PE=3 SV=1
E7F654	Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Danio rerio OX=7955 GN=nol9 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16575	CLP1_P	mRNA cleavage and polyadenylation factor CLP1 P-loop	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045116	Family	Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032319	Domain	Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12755	CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000448	Biological Process	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006396	Biological Process	RNA processing	Interproscan
GO:0051731	Molecular Function	polynucleotide 5'-hydroxyl-kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06947	GRC3, NOL9; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9	EC:2.7.1.-	Ribosome biogenesis	ko03009	deepkoala