Gene detail

Detailed information of g1170.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: RMX58360.1, hypothetical protein pdam_00012525 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P17972	Potassium voltage-gated channel protein Shaw OS=Drosophila melanogaster OX=7227 GN=Shaw PE=2 SV=1
G5EFC3	Potassium voltage-gated channel protein egl-36 OS=Caenorhabditis elegans OX=6239 GN=egl-36 PE=1 SV=1
Q9UK17	A-type voltage-gated potassium channel KCND3 OS=Homo sapiens OX=9606 GN=KCND3 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08242	Methyltransf_12	Methyltransferase domain	Domain	Interproscan
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF03009	GDPD	Glycerophosphoryl diester phosphodiesterase family	Family	Interproscan
PF13202	EF-hand_5	EF hand	Domain	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan
PF00520	Ion_trans	Ion transport protein	Family	Interproscan
PF20231	DUF6589	Family of unknown function (DUF6589)	Family	Interproscan
PF10545	MADF_DNA_bdg	Alcohol dehydrogenase transcription factor Myb/SANT-like	Domain	Interproscan
PF02944	BESS	BESS motif	Motif	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR026113	Family	tRNA N(3)-methylcytidine methyltransferase METTL2/6/8-like	Interproscan
IPR013217	Domain	Methyltransferase type 12	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR050327	Family	Proton-linked Monocarboxylate Transporter	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR030395	Domain	Glycerophosphodiester phosphodiesterase domain	Interproscan
IPR017946	Homologous_superfamily	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	Interproscan
IPR035969	Homologous_superfamily	Rab-GAP-TBC domain superfamily	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR052394	Family	Leucine-rich repeat-containing protein	Interproscan
IPR005821	Domain	Ion transport domain	Interproscan
IPR046496	Domain	Domain of unknown function DUF6589	Interproscan
IPR006578	Domain	MADF domain	Interproscan
IPR004210	Domain	BESS motif	Interproscan
IPR039353	Family	Transcription factor Adf-1	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22809	METHYLTRANSFERASE-RELATED	Interproscan
PTHR11360	MONOCARBOXYLATE TRANSPORTER	Interproscan
PTHR46211	GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE	Interproscan
PTHR24114	LEUCINE RICH REPEAT FAMILY PROTEIN	Interproscan
PTHR11537	VOLTAGE-GATED POTASSIUM CHANNEL	Interproscan
PTHR12243	MADF DOMAIN TRANSCRIPTION FACTOR	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0052735	Molecular Function	tRNA (cytidine-3-)-methyltransferase activity	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0008028	Molecular Function	monocarboxylic acid transmembrane transporter activity	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0006629	Biological Process	lipid metabolic process	Interproscan
GO:0008081	Molecular Function	phosphoric diester hydrolase activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005216	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811	Biological Process	monoatomic ion transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005249	Molecular Function	voltage-gated potassium channel activity	Interproscan
GO:0005251	Molecular Function	delayed rectifier potassium channel activity	Interproscan
GO:0008076	Cellular Component	voltage-gated potassium channel complex	Interproscan
GO:0071805	Biological Process	potassium ion transmembrane transport	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12895	RALY, HNRNPCL2; RNA-binding protein Raly	-	Transporters	ko02000	deepkoala
K12895	RALY, HNRNPCL2; RNA-binding protein Raly	-	Spliceosome	ko03041	deepkoala