Detailed information of g1175.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_048580423.1, uncharacterized protein LOC116604791 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5R614Leucine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=LARS1 PE=2 SV=1
Q8BMJ2Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2
Q9P2J5Leucine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=LARS1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF04080Per1Per1-like familyFamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF04801RPC5RPC5 proteinFamilyInterproscan
PF04180LTVLow temperature viability protein FamilyInterproscan
PF12038DUF3524Domain of unknown function (DUF3524)FamilyInterproscan
PF08264Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan
PF09334tRNA-synt_1gtRNA synthetases class I (M)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR007217FamilyPer1-likeInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR006886FamilyDNA-directed RNA polymerase III subunit Rpc5Interproscan
IPR031390FamilyOrofacial cleft 1 candidate gene 1 proteinInterproscan
IPR007307FamilyLow temperature viability protein Ltv1Interproscan
IPR022701DomaintRNA-queuosine alpha-mannosyltransferase, N-terminalInterproscan
IPR051862FamilyGlycosyltransferase-like domain-containing protein 1Interproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR004493FamilyLeucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolicInterproscan
IPR009008Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR013155DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR015413DomainMethionyl/Leucyl tRNA synthetaseInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13148PER1-RELATEDInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR12069DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5Interproscan
PTHR33862OROFACIAL CLEFT 1 CANDIDATE GENE 1 PROTEINInterproscan
PTHR21531LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATEDInterproscan
PTHR13615GLYCOSYLTRANSFERASE-LIKE 1Interproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45794LEUCYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006506Biological ProcessGPI anchor biosynthetic processInterproscan
GO:0016788Molecular Functionhydrolase activity, acting on ester bondsInterproscan
GO:0031227Cellular Componentobsolete intrinsic component of endoplasmic reticulum membraneInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0042797Biological ProcesstRNA transcription by RNA polymerase IIIInterproscan
GO:0042274Biological Processribosomal small subunit biogenesisInterproscan
GO:0000056Biological Processribosomal small subunit export from nucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0030688Cellular Componentpreribosome, small subunit precursorInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004823Molecular Functionleucine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006429Biological Processleucyl-tRNA aminoacylationInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14798LTV1; protein LTV1-Transcription factorsko03000deepkoala
Ribosome biogenesisko03009deepkoala

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