Detailed information of g1178.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: BBE28384.1, GTP-binding protein [Aurelia sp. KA-2018]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q99ME9GTP-binding protein 4 OS=Mus musculus OX=10090 GN=Gtpbp4 PE=1 SV=3
Q9BZE4GTP-binding protein 4 OS=Homo sapiens OX=9606 GN=GTPBP4 PE=1 SV=3
Q9V411Nucleolar GTP-binding protein 1 OS=Drosophila melanogaster OX=7227 GN=Non1 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyCBF
Ubiquitin FamilyE3|E3 adaptor Cullin RING|Cullin

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00888CullinCullin familyRepeatInterproscan
PF17835NOG1_NNOG1 N-terminal helical domainDomainInterproscan
PF06858NOG1Nucleolar GTP-binding protein 1 (NOG1)FamilyInterproscan
PF08155NOGCTNOGCT (NUC087) domainDomainInterproscan
PF02278Lyase_8Polysaccharide lyase family 8, super-sandwich domainFamilyInterproscan
PF09093Lyase_catalytLyase, catalyticRepeatInterproscan
PF09092Lyase_NLyase, N terminalDomainInterproscan
PF01398JABJAB1/Mov34/MPN/PAD-1 ubiquitin proteaseFamilyInterproscan
PF02312CBF_betaCore binding factor beta subunitFamilyInterproscan
PF00753Lactamase_BMetallo-beta-lactamase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044554FamilyAnaphase-promoting complex subunit 2Interproscan
IPR016158DomainCullin homology domainInterproscan
IPR036317Homologous_superfamilyCullin homology domain superfamilyInterproscan
IPR001373DomainCullin, N-terminalInterproscan
IPR041623DomainNOG1, N-terminal helical domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR006073DomainGTP binding domainInterproscan
IPR031167DomainOBG-type guanine nucleotide-binding (G) domainInterproscan
IPR010674DomainNucleolar GTP-binding protein 1, Rossman-fold domainInterproscan
IPR012973DomainNOG, C-terminalInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR003159DomainPolysaccharide lyase family 8, central domainInterproscan
IPR011071Homologous_superfamilyPolysaccharide lyase family 8-like, C-terminalInterproscan
IPR039174FamilyChondroitin sulfate ABC lyaseInterproscan
IPR008929Homologous_superfamilyChondroitin AC/alginate lyaseInterproscan
IPR015177DomainLyase, catalyticInterproscan
IPR011013Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR015176DomainLyase, N-terminalInterproscan
IPR014718Homologous_superfamilyGlycoside hydrolase-type carbohydrate-bindingInterproscan
IPR051822FamilyGlycosyl Hydrolase Family 84Interproscan
IPR036716Homologous_superfamilyPesticidal crystal protein, N-terminal domain superfamilyInterproscan
IPR037518DomainMPN domainInterproscan
IPR000555DomainJAB1/MPN/MOV34 metalloenzyme domainInterproscan
IPR036552Homologous_superfamilyCore-binding factor, beta subunit superfamilyInterproscan
IPR003417FamilyCore-binding factor, beta subunitInterproscan
IPR039344FamilyMetallo-beta-lactamase domain-containing protein 1Interproscan
IPR001279DomainMetallo-beta-lactamaseInterproscan
IPR036866Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45957ANAPHASE-PROMOTING COMPLEX SUBUNIT 2Interproscan
PTHR45759NUCLEOLAR GTP-BINDING PROTEIN 1Interproscan
PTHR37322-Interproscan
PTHR13170O-GLCNACASEInterproscan
PTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDInterproscan
PTHR10276CORE-BINDING FACTOR, BETA SUBUNITInterproscan
PTHR23200UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005680Cellular Componentanaphase-promoting complexInterproscan
GO:0007091Biological Processmetaphase/anaphase transition of mitotic cell cycleInterproscan
GO:0070979Biological Processprotein K11-linked ubiquitinationInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0042273Biological Processribosomal large subunit biogenesisInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0006027Biological Processglycosaminoglycan catabolic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0090729Molecular Functiontoxin activityInterproscan
GO:0008180Cellular ComponentCOP9 signalosomeInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008233Molecular Functionpeptidase activityInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016513Cellular Componentcore-binding factor complexInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25826CBFB; core-binding factor subunit beta-Transcription-deepkoala

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