Detailed information of g118.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020912663.1, structural maintenance of chromosomes protein 3 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9CW03Structural maintenance of chromosomes protein 3 OS=Mus musculus OX=10090 GN=Smc3 PE=1 SV=2
Q9UQE7Structural maintenance of chromosomes protein 3 OS=Homo sapiens OX=9606 GN=SMC3 PE=1 SV=2
Q5R4K5Structural maintenance of chromosomes protein 3 OS=Pongo abelii OX=9601 GN=SMC3 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHSF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03144GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan
PF03143GTP_EFTU_D3Elongation factor Tu C-terminal domainDomainInterproscan
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan
PF02893GRAMGRAM domainDomainInterproscan
PF19055ABC2_membrane_7ABC-2 type transporterFamilyInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF01061ABC2_membraneABC-2 type transporterFamilyInterproscan
PF15998DUF4773Domain of unknown function (DUF4773)FamilyInterproscan
PF00447HSF_DNA-bindHSF-type DNA-bindingDomainInterproscan
PF02463SMC_NRecF/RecN/SMC N terminal domainDomainInterproscan
PF06470SMC_hingeSMC proteins Flexible Hinge DomainDomainInterproscan
PF04133Vps55Vacuolar protein sorting 55 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR004161DomainTranslation elongation factor EFTu-like, domain 2Interproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR050055FamilyElongation factor Tu GTPaseInterproscan
IPR033720DomainElongation factor Tu, domain 2Interproscan
IPR004541FamilyTranslation elongation factor EFTu/EF1A, bacterial/organelleInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004160DomainTranslation elongation factor EFTu/EF1A, C-terminalInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR009001Homologous_superfamilyTranslation elongation factor EF1A/initiation factor IF2gamma, C-terminalInterproscan
IPR041709DomainElongation factor Tu (EF-Tu), GTP-binding domainInterproscan
IPR031157Conserved_siteTr-type G domain, conserved siteInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR039477DomainILEI/PANDER domainInterproscan
IPR036017DomainTCB1D9/TCB1D9B, PH-GRAM domain 2Interproscan
IPR004182DomainGRAM domainInterproscan
IPR036014DomainTCB1D9/TCB1D9B, PH-GRAM domain 1Interproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR050352FamilyATP-binding cassette subfamily G transportersInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR043926DomainABC transporter family G domainInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR013525DomainABC-2 type transporter, transmembrane domainInterproscan
IPR031941DomainDomain of unknown function DUF4773Interproscan
IPR000232DomainHeat shock factor (HSF)-type, DNA-bindingInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR003395DomainRecF/RecN/SMC, N-terminalInterproscan
IPR041741DomainStructural maintenance of chromosomes 3, ABC domain, eukaryoticInterproscan
IPR010935DomainSMCs flexible hingeInterproscan
IPR036277Homologous_superfamilySMCs flexible hinge superfamilyInterproscan
IPR007262FamilyVps55/LEPROTInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43721ELONGATION FACTOR TU-RELATEDInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47666PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTICInterproscan
PTHR48041ABC TRANSPORTER G FAMILY MEMBER 28Interproscan
PTHR36299AGAP008005-PAInterproscan
PTHR43977STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3Interproscan
PTHR12050LEPTIN RECEPTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0070125Biological Processmitochondrial translational elongationInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0007064Biological Processmitotic sister chromatid cohesionInterproscan
GO:0034990Cellular Componentmitotic cohesin complexInterproscan
GO:0061775Molecular Functioncohesin loader activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0051276Biological Processchromosome organizationInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0032511Biological Processlate endosome to vacuole transport via multivesicular body sorting pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02358tuf, TUFM; elongation factor Tu-CD moleculesko04090deepkoala
Exosomeko04147deepkoala

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