Gene detail

Detailed information of g11826.t1.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: XP_047130013.1, putative ATP-dependent RNA helicase TDRD12 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A3LQ55	Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=PRP5 PE=3 SV=2
Q8H0U8	DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana OX=3702 GN=RH42 PE=1 SV=2
Q5R6D8	Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii OX=9601 GN=DDX46 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF00567	TUDOR	Tudor domain	Domain	Interproscan
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR014014	Domain	RNA helicase, DEAD-box type, Q motif	Interproscan
IPR035437	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan
IPR002999	Domain	Tudor domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR001251	Domain	CRAL-TRIO lipid binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22655	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0042078	Biological Process	germ-line stem cell division	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18409	TDRD12; ATP-dependent RNA helicase TDRD12	EC:5.6.2.5	Chromosome and associated proteins	ko03036	deepkoala