Detailed information of g1183.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_038076840.1, E3 ubiquitin-protein ligase TRAIP-like [Patiria miniata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
G5EBQ8Chitin synthase chs-2 OS=Caenorhabditis elegans OX=6239 GN=chs-2 PE=1 SV=1
G5ECD6Chitin synthase chs-1 OS=Caenorhabditis elegans OX=6239 GN=chs-1 PE=1 SV=1
Q8T5G8Chitin synthase OS=Meloidogyne artiellia OX=42426 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF07699Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF02494HYRHYR domainDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF00252Ribosomal_L16Ribosomal protein L16p/L10eDomainInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF03142Chitin_synth_2Chitin synthaseFamilyInterproscan
PF07647SAM_2SAM domain (Sterile alpha motif)DomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00188CAPCysteine-rich secretory protein familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR043555FamilySushi repeat-containing protein SRPX-likeInterproscan
IPR011641DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR003410DomainHYR domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR052639FamilyTRAIP E3 ubiquitin-protein ligaseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR045162FamilySerine/threonine-protein kinase Vps15-likeInterproscan
IPR036920Homologous_superfamilyLarge ribosomal subunit protein uL16 superfamilyInterproscan
IPR000114FamilyLarge ribosomal subunit protein uL16, bacterial-typeInterproscan
IPR047873FamilyLarge ribosomal subunit protein uL16Interproscan
IPR016180DomainLarge ribosomal subunit protein uL16 domainInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR004835FamilyChitin synthaseInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR035940Homologous_superfamilyCAP superfamilyInterproscan
IPR034113DomainGolgi-associated plant pathogenesis-related protein 1, SCP domainInterproscan
IPR001283FamilyCysteine-rich secretory protein-relatedInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR014044DomainCAP domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR46343HYR DOMAIN-CONTAINING PROTEINInterproscan
PTHR46569E3 UBIQUITIN-PROTEIN LIGASE TRAIPInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR17583PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4Interproscan
PTHR1222050S/60S RIBOSOMAL PROTEIN L16Interproscan
PTHR22914CHITIN SYNTHASEInterproscan
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan
PTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031297Biological Processreplication fork processingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0090734Cellular Componentsite of DNA damageInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005770Cellular Componentlate endosomeInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0016236Biological ProcessmacroautophagyInterproscan
GO:0030242Biological Processautophagy of peroxisomeInterproscan
GO:0034271Cellular Componentphosphatidylinositol 3-kinase complex, class III, type IInterproscan
GO:0034272Cellular Componentphosphatidylinositol 3-kinase complex, class III, type IIInterproscan
GO:0045324Biological Processlate endosome to vacuole transportInterproscan
GO:0071561Cellular Componentnucleus-vacuole junctionInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0005762Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0032543Biological Processmitochondrial translationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004100Molecular Functionchitin synthase activityInterproscan
GO:0006038Biological Processobsolete cell wall chitin biosynthetic processInterproscan
GO:0016758Molecular Functionhexosyltransferase activityInterproscan
GO:0030428Cellular Componentcell septumInterproscan
GO:0071944Cellular Componentcell peripheryInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00698CHS1; chitin synthaseEC:2.4.1.16
Ubiquitin systemko04121deepkoala
Glycosyltransferasesko01003deepkoala

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