Gene detail

Detailed information of g11850.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_021351432.1, spindle assembly abnormal protein 6 homolog [Mizuhopecten yessoensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

g11850.t1

ATGATAAACAAGACATGTAATATGGACCCTCTACCAGCATTGCTTATGAAAGCCAACTCTGACATAATAAACACTACAATACCATTTATAATAAACTTCTCAATCACTTATGACATTGTTTCTTCTTCGTTCAAAGATGCTTTGCTAAAGCCTCGTCTAAAGAATTCATCTATTGATCCTTTACAATATGCAAGTTTTCGACCCATCTcgaatttgaaatttgcaagTAAAGCTATCGATAAAGTAGTGACGCAACAAGTATATCGACATATGTCTGAAAATGGTCTTCACGAGAGTCTCCAACCAGCATACAAAATCCACCACAGTACAAAAAGAGCATTGCTTCATATTCATAATGACACAAAAGAAGAAATCGTCATCAGATTAACTAGCGAAAATGATTTGTCTCTTCTTTatacattgaaaataaatcaagaaGATTTTCAAAGATTAAAAGATGAACAGCATCTGctgattgattttgattcaTTTCCAAATCAACTCATTGAGCTATTGGATGATTGCATATGCGATAACAAAGATTCATCTCCAAAGTTTGTGCTTGGGCTTAAATCATCATCCCTACCAAAATCACATGCTACTTTGGAGGTAGTAGAGAGAAATatcttcaaaagtttgattcATTTGTCACTGACATTGGTACCTGGAAAAGATGCAGATGTGAAAAATTATCTTGCATCATGTTTGAATACTGTGAAGGATGAAAAGTGTGCTCTCTTGAAGAATTTGCATGACACCGAGGAAGATTTAAAACTGAAATTGTCTATTGCATCTGGGATGTTAGAAGCAAGGACTCAAGAACTCGAACAAGCAAGAACACAATGGTCATTGCAAATAGAAGAACTTATGCAACAGAAAACcaatgaaattgttgaaagGGATAGACATCTATTAAAGTTACAAACAACTTATGAAGATAAAATATCAAGAAGACATACCGAAGCACAACAAACACACAGACAAATGGATCAATCAGCCAAATTATCTGATGCAATCTCAACAGTAAAAAGTCAAAATAGCCAAATAATTGTTCTAGAAAAGGAAAATAAAGAGATGAAAAGTGAAATCCAAGTCATGTGCGAACACGAACGTCTAAAGCATGGAGAAGAATCAAACAAAAATCGGACACTTCAATATTTACAAGCTAAAATGGATGATATGCTGAAAATTATTGAGGAAAAAGACAAGGTCATTGAGAATTCTACAGAGGCACTTAGGTTGGCTAATATGGAAAAGatcaattttgaaaaagaactTCATagcaaaataagaaatatgtCAAAGCTACAGGCATCTCTGGACTCAATGTCACATGAAATCTCAAAGGGAAACAACATCATTCAGAGACTTCAAAATGAACTAAAACATTGCAACAGCCAGATCAAGTCAAAAAACTCAATCACTGCAAAACAAGAAAAGGTTATCAATGACCAGGAAGAAAACATTCTCAAGCAAGACAAAAATACTGAAAATCTGAAAGAGGAGTTGACGAATGCTAATGCTGAGAAGGACAAGCTAACACAATCATGTACAACGTTGTCTGAAAAATTAGATGAGATGAAAGAGCTTATAAAAACAAACGAGAATGTAATCAATTGGCTCAGTAAGCAACTGAATGGTATTAGTCCTGGAGGTACTACTGAAGGCAAACTTCACTTAACTGATGGTTCTTCTTTGCATTTGTCCAGCAGACAAGATCAACTGCGCAAACTTGGACCAATGCAGAGCACACCAAATTCTATCACACAAAGTGTAGCGATGGGAccaaacaaacatattttatcaaaagacTTCAGCTACCCAATCCCACGGCATTATCAACAGCAAGTAATGTACAGACCACCTTTAAGGCATGATACCAACAAAGTTTCAAATCTCAAAGTCACATCAACTCCAGCTGATACAGTACAACCACAAGTCCCAAGAAAGATTTTTAACGCAATGGAAAAGGAGAAGCCTTTGTTAGATGCAAAATATCTGaaggaaaaagaaaatattgaaacaatagTAGAGACTGAAGATTTGACTGCGGTGTGCACAAAGCCAttcatattataa

Transcript

g11850.t1

Protein

Uniprot

Uniprot term	Description
Q7ZVT3	Spindle assembly abnormal protein 6 homolog OS=Danio rerio OX=7955 GN=sass6 PE=1 SV=1
Q6NRG6	Spindle assembly abnormal protein 6 homolog OS=Xenopus laevis OX=8355 GN=sas6 PE=2 SV=1
Q80UK7	Spindle assembly abnormal protein 6 homolog OS=Mus musculus OX=10090 GN=Sass6 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18594	Sas6_CC	Sas6/XLF/XRCC4 coiled-coil domain	Coiled-coil	Interproscan
PF16531	SAS-6_N	Centriolar protein SAS N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038558	Homologous_superfamily	SAS-6, N-terminal domain superfamily	Interproscan
IPR041513	Domain	SAS-6 coiled-coil domain	Interproscan
IPR032396	Domain	Spindle assembly abnormal protein 6, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44281	SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0005814	Cellular Component	centriole	Interproscan
GO:0007099	Biological Process	centriole replication	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16487	SAS-6, SASS6; spindle assembly abnormal protein 6	-	Chromosome and associated proteins	ko03036	deepkoala