Detailed information of g1187.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047127933.1, syntaxin-binding protein 5 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5T5C0Syntaxin-binding protein 5 OS=Homo sapiens OX=9606 GN=STXBP5 PE=1 SV=1
Q9WU70Syntaxin-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Stxbp5 PE=1 SV=1
Q8K400Syntaxin-binding protein 5 OS=Mus musculus OX=10090 GN=Stxbp5 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05964FYRNF/Y-rich N-terminusFamilyInterproscan
PF00856SETSET domainFamilyInterproscan
PF05965FYRCF/Y rich C-terminusFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF08366LLGLLLGL2FamilyInterproscan
PF08596Lgl_CLethal giant larvae(Lgl) like, C-terminalRepeatInterproscan
PF05502Dynactin_p62Dynactin p62 familyFamilyInterproscan
PF00254FKBP_CFKBP-type peptidyl-prolyl cis-trans isomeraseDomainInterproscan
PF14559TPR_19Tetratricopeptide repeatRepeatInterproscan
PF01433Peptidase_M1Peptidase family M1 domainDomainInterproscan
PF17900Peptidase_M1_NPeptidase M1 N-terminal domainDomainInterproscan
PF00474SSFSodium:solute symporter familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR042234FamilyWD repeat and FYVE domain-containing protein 1/2Interproscan
IPR001680RepeatWD40 repeatInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR003888Conserved_siteFY-rich, N-terminalInterproscan
IPR001214DomainSET domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR003889Conserved_siteFY-rich, C-terminalInterproscan
IPR034732DomainExtended PHD (ePHD) domainInterproscan
IPR000664FamilyLethal(2) giant larvae proteinInterproscan
IPR013577DomainLethal giant larvae homologue 2Interproscan
IPR013905DomainLethal giant larvae (Lgl)-like, C-terminal domainInterproscan
IPR008603FamilyDynactin subunit 4Interproscan
IPR042282FamilyInactive peptidyl-prolyl cis-trans isomerase FKBP6/shutdownInterproscan
IPR001179DomainFKBP-type peptidyl-prolyl cis-trans isomerase domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR046357Homologous_superfamilyPeptidyl-prolyl cis-trans isomerase domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR014782DomainPeptidase M1, membrane alanine aminopeptidaseInterproscan
IPR042097Homologous_superfamilyAminopeptidase N-like , N-terminal domain superfamliyInterproscan
IPR027268Homologous_superfamilyPeptidase M4/M1, CTD superfamilyInterproscan
IPR045357DomainAminopeptidase N-like , N-terminal domainInterproscan
IPR001930FamilyPeptidase M1, alanine aminopeptidase/leukotriene A4 hydrolaseInterproscan
IPR049980DomainLeukotriene A4 hydrolase-like, catalytic domainInterproscan
IPR034015FamilyAminopeptidase, leukotriene A4 hydrolase-likeInterproscan
IPR052244FamilyHigh-affinity choline transporterInterproscan
IPR001734FamilySodium/solute symporterInterproscan
IPR038377Homologous_superfamilySodium/glucose symporter superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46189LD41958PInterproscan
PTHR45888HL01030P-RELATEDInterproscan
PTHR10241LETHAL 2 GIANT LARVAE PROTEINInterproscan
PTHR13034DYNACTIN P62 SUBUNITInterproscan
PTHR46674INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6Interproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan
PTHR45726LEUKOTRIENE A-4 HYDROLASEInterproscan
PTHR45897HIGH-AFFINITY CHOLINE TRANSPORTER 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005769Cellular Componentearly endosomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0042800Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0044666Cellular ComponentMLL3/4 complexInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0017157Biological Processregulation of exocytosisInterproscan
GO:0019905Molecular Functionsyntaxin bindingInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0045159Molecular Functionmyosin II bindingInterproscan
GO:0050708Biological Processregulation of protein secretionInterproscan
GO:0005869Cellular Componentdynactin complexInterproscan
GO:0007283Biological ProcessspermatogenesisInterproscan
GO:0034587Biological ProcesspiRNA processingInterproscan
GO:0051879Molecular FunctionHsp90 protein bindingInterproscan
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0004177Molecular Functionaminopeptidase activityInterproscan
GO:0004301Molecular Functionepoxide hydrolase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0043171Biological Processpeptide catabolic processInterproscan
GO:0005307Molecular Functioncholine:sodium symporter activityInterproscan
GO:0008292Biological Processacetylcholine biosynthetic processInterproscan
GO:0015871Biological Processcholine transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23345GLMN; glomulin-Chaperones and folding catalystsko03110deepkoala
Ubiquitin systemko04121deepkoala

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