Detailed information of g1189.t2 in Tripedalia maipoensis

Genomic Location: scaffold_1:57804706...57827248
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00736
all species →		EF1_GNEEF-1 guanine nucleotide exchange domainDomainInterproscan
PF10587
all species →		EF-1_beta_acidEukaryotic elongation factor 1 beta central acidic regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049720
all species →		FamilyTranslation elongation factor EF1B, beta/delta subunitInterproscan
IPR014038
all species →		DomainTranslation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainInterproscan
IPR018940
all species →		DomainElongation factor 1 beta central acidic region, eukaryoteInterproscan
IPR014717
all species →		Homologous_superfamilyTranslation elongation factor EF1B/small ribosomal subunit protein bS6Interproscan
IPR001326
all species →		Conserved_siteTranslation elongation factor EF1B, beta/delta chains, conserved siteInterproscan
IPR036219
all species →		Homologous_superfamilyTranslation elongation factor eEF-1beta-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11595
all species →		EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003746
all species →		Molecular Functiontranslation elongation factor activityInterproscan
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0005853
all species →		Cellular Componenteukaryotic translation elongation factor 1 complexInterproscan
GO:0006414
all species →		Biological Processtranslational elongationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g1189.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP