Detailed information of g1192.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047142339.1, major vault protein [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5EAJ7Major vault protein OS=Strongylocentrotus purpuratus OX=7668 GN=MVP PE=1 SV=1
Q6P3L0Major vault protein OS=Danio rerio OX=7955 GN=mvp PE=2 SV=1
Q9DGM7Major vault protein (Fragment) OS=Ictalurus punctatus OX=7998 GN=mvp PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01505VaultMajor Vault Protein repeat domainDomainInterproscan
PF11978MVP_shoulderShoulder domainDomainInterproscan
PF17796Vault_4Major Vault Protein repeat domainDomainInterproscan
PF17795Vault_3Major Vault Protein Repeat domainDomainInterproscan
PF17794Vault_2Major Vault Protein repeat domainDomainInterproscan
PF02966DIM1Mitosis protein DIM1DomainInterproscan
PF09799Transmemb_17Predicted membrane proteinFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF00083Sugar_trSugar (and other) transporterFamilyInterproscan
PF03770IPKInositol polyphosphate kinase FamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043179Homologous_superfamilyMajor vault protein repeat domain 2 superfamilyInterproscan
IPR041139DomainMajor vault protein repeat domainInterproscan
IPR002499RepeatMajor vault protein, N-terminalInterproscan
IPR021870DomainMajor vault protein, shoulder domainInterproscan
IPR043023Homologous_superfamilyMajor vault protein repeat domain superfamilyInterproscan
IPR041136DomainMajor vault protein repeat domain 4Interproscan
IPR040989DomainMajor vault protein repeat domain 3Interproscan
IPR036013Homologous_superfamilyBand 7/SPFH domain superfamilyInterproscan
IPR041134DomainMajor vault protein repeat domain 2Interproscan
IPR039059FamilyMajor vault proteinInterproscan
IPR004123FamilyDim1 familyInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR019184FamilyUncharacterised protein family, transmembrane-17Interproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050995FamilyWD repeat and F-box domain-containing proteinInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR005828FamilyMajor facilitator, sugar transporter-likeInterproscan
IPR038286Homologous_superfamilyInositol polyphosphate kinase superfamilyInterproscan
IPR005522FamilyInositol polyphosphate kinaseInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14165MAJOR VAULT PROTEINInterproscan
PTHR12052THIOREDOXIN-LIKE PROTEN 4A, 4BInterproscan
PTHR13531GEO07735P1-RELATED-RELATEDInterproscan
PTHR14604WD40 REPEAT PF20Interproscan
PTHR45749-Interproscan
PTHR31025SI:CH211-196P9.1-RELATEDInterproscan
PTHR23511SYNAPTIC VESICLE GLYCOPROTEIN 2Interproscan
PTHR12400INOSITOL POLYPHOSPHATE KINASEInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0005682Cellular ComponentU5 snRNPInterproscan
GO:0035869Cellular Componentciliary transition zoneInterproscan
GO:1905515Biological Processnon-motile cilium assemblyInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0016301Molecular Functionkinase activityInterproscan
GO:0032958Biological Processinositol phosphate biosynthetic processInterproscan
GO:0008440Molecular Functioninositol-1,4,5-trisphosphate 3-kinase activityInterproscan
GO:0051765Molecular Functioninositol tetrakisphosphate kinase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12859TXNL4A, DIB1; U5 snRNP protein, DIM1 family-Exosomeko04147deepkoala
Cilium and associated proteinsko03037deepkoala
Phosphatidylinositol signaling systemko04070deepkoala
Spliceosomeko03041deepkoala

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