Gene detail

Detailed information of g1196.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: ALY05312.1, paired-like homeodomain protein [Clytia hemisphaerica]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O42115	Aristaless-related homeobox protein OS=Danio rerio OX=7955 GN=arx PE=2 SV=1
Q96QS3	Homeobox protein ARX OS=Homo sapiens OX=9606 GN=ARX PE=1 SV=1
O35085	Homeobox protein ARX OS=Mus musculus OX=10090 GN=Arx PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000214 (this species only)
Orthogroup (gene family)	OG0000383 (this species only)
Orthogroup (gene family)	OG0000385 (this species only)
Orthogroup (gene family)	OG0000607 (this species only)
Orthogroup (gene family)	OG0000935 (this species only)
Orthogroup (gene family)	OG0001378 (this species only)
Orthogroup (gene family)	OG0001471 (this species only)
Orthogroup (gene family)	OG0001719 (this species only)
Orthogroup (gene family)	OG0002573 (this species only)
Orthogroup (gene family)	OG0005870 (this species only)
Orthogroup (gene family)	OG0007870 (this species only)
Orthogroup (gene family)	OG0017419 (this species only)
Orthogroup (gene family)	OG0171118 (this species only)
Transcription factor family	Homeobox · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046 all species →	Homeodomain	Homeodomain	Domain	Interproscan
PF08449 all species →	UAA	UAA transporter family	Family	Interproscan
PF00225 all species →	Kinesin	Kinesin motor domain	Domain	Interproscan
PF01145 all species →	Band_7	SPFH domain / Band 7 family	Family	Interproscan
PF02373 all species →	JmjC	JmjC domain, hydroxylase	Domain	Interproscan
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan
PF01490 all species →	Aa_trans	Transmembrane amino acid transporter protein	Family	Interproscan
PF04182 all species →	B-block_TFIIIC	B-block binding subunit of TFIIIC	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356 all species →	Domain	Homeobox domain	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017970 all species →	Conserved_site	Homeobox, conserved site	Interproscan
IPR050649 all species →	Family	Paired Homeobox Transcription Factors	Interproscan
IPR013657 all species →	Family	SLC35B1-4/HUT1	Interproscan
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027640 all species →	Family	Kinesin-like protein	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001107 all species →	Domain	Band 7 domain	Interproscan
IPR036013 all species →	Homologous_superfamily	Band 7/SPFH domain superfamily	Interproscan
IPR043202 all species →	Family	Band-7 stomatin-like	Interproscan
IPR018080 all species →	Conserved_site	Band 7/stomatin-like, conserved site	Interproscan
IPR001972 all species →	Family	Stomatin/HflK family	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR003347 all species →	Domain	JmjC domain	Interproscan
IPR050690 all species →	Family	JHDM1 Histone Demethylase	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR051342 all species →	Family	PDZ domain-containing scaffold protein	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR013057 all species →	Domain	Amino acid transporter, transmembrane domain	Interproscan
IPR044210 all species →	Family	Transcription facto Tfc3-like	Interproscan
IPR007309 all species →	Domain	B-block binding subunit of TFIIIC	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24329 all species →	HOMEOBOX PROTEIN ARISTALESS	Interproscan
PTHR10778 all species →	SOLUTE CARRIER FAMILY 35 MEMBER B	Interproscan
PTHR24115 all species →	KINESIN-RELATED	Interproscan
PTHR10264 all species →	BAND 7 PROTEIN-RELATED	Interproscan
PTHR47027 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR24246 all species →	OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR	Interproscan
PTHR23123 all species →	PHD/F-BOX CONTAINING PROTEIN	Interproscan
PTHR19964 all species →	MULTIPLE PDZ DOMAIN PROTEIN	Interproscan
PTHR45749 all species →	-	Interproscan
PTHR22950 all species →	AMINO ACID TRANSPORTER	Interproscan
PTHR15180 all species →	GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1	Interproscan
PTHR16059 all species →	ANTHRAX TOXIN RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000977 all species →	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005462 all species →	Molecular Function	UDP-N-acetylglucosamine transmembrane transporter activity	Interproscan
GO:0005464 all species →	Molecular Function	UDP-xylose transmembrane transporter activity	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0030173 all species →	Cellular Component	obsolete integral component of Golgi membrane	Interproscan
GO:0030176 all species →	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005871 all species →	Cellular Component	kinesin complex	Interproscan
GO:0005874 all species →	Cellular Component	microtubule	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0006482 all species →	Biological Process	protein demethylation	Interproscan
GO:0032452 all species →	Molecular Function	histone demethylase activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003333 all species →	Biological Process	amino acid transmembrane transport	Interproscan
GO:0005774 all species →	Cellular Component	vacuolar membrane	Interproscan
GO:0015179 all species →	Molecular Function	L-amino acid transmembrane transporter activity	Interproscan
GO:0000127 all species →	Cellular Component	transcription factor TFIIIC complex	Interproscan
GO:0006384 all species →	Biological Process	transcription initiation at RNA polymerase III promoter	Interproscan
GO:0042791 all species →	Biological Process	5S class rRNA transcription by RNA polymerase III	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14209	SLC36A, PAT; solute carrier family 36 (proton-coupled amino acid transporter)	-	Transporters	ko02000	deepkoala
K17286	STOM; stomatin	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.