Detailed information of g11968.t1 in Montipora capitata

Genomic Location: Sc0000372:28753...51845
NR annotation: XP_029186826.2, uncharacterized protein LOC114954423 [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q66IH2Transforming growth factor beta regulator 1 OS=Xenopus tropicalis OX=8364 GN=tbrg1 PE=2 SV=1
Q3YBR2Transforming growth factor beta regulator 1 OS=Homo sapiens OX=9606 GN=TBRG1 PE=1 SV=1
Q5PQK8Transforming growth factor beta regulator 1 OS=Rattus norvegicus OX=10116 GN=Tbrg1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004014 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05965
all species →
FYRCF/Y rich C-terminusFamilyInterproscan
PF05964
all species →
FYRNF/Y-rich N-terminusFamilyInterproscan
PF05066
all species →
HARE-HTHHB1, ASXL, restriction endonuclease HTH domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003889
all species →
Conserved_siteFY-rich, C-terminalInterproscan
IPR040092
all species →
FamilyTransforming growth factor beta regulator 1Interproscan
IPR007759
all species →
DomainASXL, HARE-HTH domainInterproscan
IPR003888
all species →
Conserved_siteFY-rich, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22715
all species →
TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0051726
all species →
Biological Processregulation of cell cycleInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g11968.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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