Detailed information of g1199.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047125699.1, nuclear pore complex protein Nup54 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7Z3B4Nucleoporin p54 OS=Homo sapiens OX=9606 GN=NUP54 PE=1 SV=2
P70582Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 SV=1
Q8BTS4Nuclear pore complex protein Nup54 OS=Mus musculus OX=10090 GN=Nup54 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18190Plk4_PB1Polo-like Kinase 4 Polo Box 1DomainInterproscan
PF18409Plk4_PB2Polo-like Kinase 4 Polo Box 2DomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF03194LUC7LUC7 N_terminusFamilyInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF12862ANAPC5Anaphase-promoting complex subunit 5RepeatInterproscan
PF13874Nup54Nucleoporin complex subunit 54DomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF05649Peptidase_M13_NPeptidase family M13FamilyInterproscan
PF00486Trans_reg_CTranscriptional regulatory protein, C terminalDomainInterproscan
PF00072Response_regResponse regulator receiver domainDomainInterproscan
PF00173Cyt-b5Cytochrome b5-like Heme/Steroid binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033699DomainPlk4, first cryptic polo-box domainInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR046437Homologous_superfamilySerine/threonine-protein kinase, first cryptic polo-box domain superfamilyInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR033698DomainPlk4, second cryptic polo-box domainInterproscan
IPR000959DomainPOLO box domainInterproscan
IPR047108Homologous_superfamilyPlk4-like, second cryptic polo-box domain superfamilyInterproscan
IPR008266Active_siteTyrosine-protein kinase, active siteInterproscan
IPR004882FamilyLuc7-relatedInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR040395FamilyTetratricopeptide repeat protein 19Interproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR026000DomainAnaphase-promoting complex subunit 5 domainInterproscan
IPR025712DomainNucleoporin Nup54, alpha-helical domainInterproscan
IPR024864FamilyNucleoporin Nup54/Nup57/Nup44Interproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR043545FamilyGlutamate receptor-interacting protein 1/2Interproscan
IPR001478DomainPDZ domainInterproscan
IPR042089Homologous_superfamilyPeptidase M13, domain 2Interproscan
IPR008753DomainPeptidase M13, N-terminal domainInterproscan
IPR000718FamilyPeptidase M13Interproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR001867DomainOmpR/PhoB-type DNA-binding domainInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR039420FamilyTranscriptional regulatory protein WalR-likeInterproscan
IPR036400Homologous_superfamilyCytochrome b5-like heme/steroid binding domain superfamilyInterproscan
IPR050577FamilyCytochrome b5/MAPR and VMP1 familiesInterproscan
IPR001199DomainCytochrome b5-like heme/steroid binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24345SERINE/THREONINE-PROTEIN KINASE PLKInterproscan
PTHR12375RNA-BINDING PROTEIN LUC7-RELATEDInterproscan
PTHR13143TETRATRICOPEPTIDE REPEAT PROTEIN 19Interproscan
PTHR13000NUCLEOPORIN P54Interproscan
PTHR46227GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIPInterproscan
PTHR11733ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATEDInterproscan
PTHR48111REGULATOR OF RPOSInterproscan
PTHR10281MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0000776Cellular ComponentkinetochoreInterproscan
GO:0000922Cellular Componentspindle poleInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0007052Biological Processmitotic spindle organizationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005685Cellular ComponentU1 snRNPInterproscan
GO:0006376Biological ProcessmRNA splice site recognitionInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan
GO:0005743Cellular Componentmitochondrial inner membraneInterproscan
GO:0034551Biological Processmitochondrial respiratory chain complex III assemblyInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006607Biological ProcessNLS-bearing protein import into nucleusInterproscan
GO:0006999Biological Processnuclear pore organizationInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0036228Biological Processprotein localization to nuclear inner membraneInterproscan
GO:0044613Cellular Componentnuclear pore central transport channelInterproscan
GO:0098887Biological Processneurotransmitter receptor transport, endosome to postsynaptic membraneInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016485Biological Processprotein processingInterproscan
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000156Molecular Functionphosphorelay response regulator activityInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0032993Cellular Componentprotein-DNA complexInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08863PLK4; polo-like kinase 4EC:2.7.11.21
Membrane traffickingko04131deepkoala
Exosomeko04147deepkoala
Chromosome and associated proteinsko03036deepkoala

TOP