Gene detail

Detailed information of g1200.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_046853798.1, hyaluronan-mediated motility receptor-like [Xenia sp. Carnegie-2017]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O75330	Hyaluronan mediated motility receptor OS=Homo sapiens OX=9606 GN=HMMR PE=1 SV=2
Q00547	Hyaluronan mediated motility receptor OS=Mus musculus OX=10090 GN=Hmmr PE=1 SV=4
P97779	Hyaluronan-mediated motility receptor OS=Rattus norvegicus OX=10116 GN=Hmmr PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000810 (this species only)
Orthogroup (gene family)	OG0001755 (this species only)
Orthogroup (gene family)	OG0003498 (this species only)
Orthogroup (gene family)	OG0004159 (this species only)
Orthogroup (gene family)	OG0004194 (this species only)
Orthogroup (gene family)	OG0006425 (this species only)
Orthogroup (gene family)	OG0006816 (this species only)
Orthogroup (gene family)	OG0007419 (this species only)
Orthogroup (gene family)	OG0036200 (this species only)
Orthogroup (gene family)	OG0059694 (this species only)
Orthogroup (gene family)	OG0171135 (this species only)
Orthogroup (gene family)	OG0171638 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03721 all species →	UDPG_MGDP_dh_N	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	Domain	Interproscan
PF03720 all species →	UDPG_MGDP_dh_C	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain	Domain	Interproscan
PF03372 all species →	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF01094 all species →	ANF_receptor	Receptor family ligand binding region	Family	Interproscan
PF00003 all species →	7tm_3	7 transmembrane sweet-taste receptor of 3 GCPR	Domain	Interproscan
PF15908 all species →	HMMR_C	Hyaluronan mediated motility receptor C-terminal	Coiled-coil	Interproscan
PF04893 all species →	Yip1	Yip1 domain	Domain	Interproscan
PF05699 all species →	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan
PF02020 all species →	W2	eIF4-gamma/eIF5/eIF2-epsilon	Repeat	Interproscan
PF05649 all species →	Peptidase_M13_N	Peptidase family M13	Family	Interproscan
PF00512 all species →	HisKA	His Kinase A (phospho-acceptor) domain	Domain	Interproscan
PF02518 all species →	HATPase_c	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan
PF00083 all species →	Sugar_tr	Sugar (and other) transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028356 all species →	Family	UDP-glucose 6-dehydrogenase, eukaryotic type	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR001732 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, N-terminal	Interproscan
IPR036220 all species →	Homologous_superfamily	UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily	Interproscan
IPR014027 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, C-terminal	Interproscan
IPR020067 all species →	Domain	Frizzled domain	Interproscan
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR027124 all species →	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR050726 all species →	Family	Metabotropic Glutamate Receptor	Interproscan
IPR028082 all species →	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan
IPR017978 all species →	Domain	GPCR family 3, C-terminal	Interproscan
IPR038550 all species →	Homologous_superfamily	GPCR, family 3, nine cysteines domain superfamily	Interproscan
IPR001828 all species →	Domain	Receptor, ligand binding region	Interproscan
IPR026203 all species →	Family	Intracellular hyaluronic acid binding protein	Interproscan
IPR031794 all species →	Domain	Hyaluronan-mediated motility receptor, C-terminal	Interproscan
IPR006977 all species →	Domain	Yip1 domain	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR008906 all species →	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR045231 all species →	Family	Protein Yip1/4-like	Interproscan
IPR003307 all species →	Domain	W2 domain	Interproscan
IPR051245 all species →	Family	eIF5-mimic translation initiation regulator	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR043510 all species →	Domain	BZW1/2, W2 domain	Interproscan
IPR042089 all species →	Homologous_superfamily	Peptidase M13, domain 2	Interproscan
IPR000718 all species →	Family	Peptidase M13	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR008753 all species →	Domain	Peptidase M13, N-terminal domain	Interproscan
IPR038256 all species →	Homologous_superfamily	DNA polymerase alpha, zinc finger domain superfamily	Interproscan
IPR036097 all species →	Homologous_superfamily	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	Interproscan
IPR003661 all species →	Domain	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	Interproscan
IPR005467 all species →	Domain	Histidine kinase domain	Interproscan
IPR036890 all species →	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR003594 all species →	Domain	Histidine kinase/HSP90-like ATPase	Interproscan
IPR004358 all species →	Domain	Signal transduction histidine kinase-related protein, C-terminal	Interproscan
IPR050351 all species →	Family	Two-component sensor protein kinase	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR020846 all species →	Domain	Major facilitator superfamily domain	Interproscan
IPR005828 all species →	Family	Major facilitator, sugar transporter-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11374 all species →	UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE	Interproscan
PTHR23227 all species →	BUCENTAUR RELATED	Interproscan
PTHR23159 all species →	CENTROSOMAL PROTEIN 2	Interproscan
PTHR24060 all species →	METABOTROPIC GLUTAMATE RECEPTOR	Interproscan
PTHR18956 all species →	HYALURONAN MEDIATED MOTILITY RECEPTOR	Interproscan
PTHR21236 all species →	GOLGI MEMBRANE PROTEIN YIP1	Interproscan
PTHR14208 all species →	BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47027 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45453 all species →	PHOSPHATE REGULON SENSOR PROTEIN PHOR	Interproscan
PTHR23511 all species →	SYNAPTIC VESICLE GLYCOPROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003979 all species →	Molecular Function	UDP-glucose 6-dehydrogenase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006024 all species →	Biological Process	glycosaminoglycan biosynthetic process	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0001640 all species →	Molecular Function	adenylate cyclase inhibiting G protein-coupled glutamate receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007216 all species →	Biological Process	G protein-coupled glutamate receptor signaling pathway	Interproscan
GO:0051966 all species →	Biological Process	regulation of synaptic transmission, glutamatergic	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005540 all species →	Molecular Function	hyaluronic acid binding	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0006888 all species →	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0048280 all species →	Biological Process	vesicle fusion with Golgi apparatus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0000155 all species →	Molecular Function	phosphorelay sensor kinase activity	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0016310 all species →	Biological Process	phosphorylation	Interproscan
GO:0016772 all species →	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan
GO:0004721 all species →	Molecular Function	phosphoprotein phosphatase activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0016036 all species →	Biological Process	cellular response to phosphate starvation	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07636	phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR	EC:2.7.13.3	Two-component system	ko02022	deepkoala
K20363	YIPF5_7, YIP1; protein YIPF5/7	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.