Detailed information of g12079.t1 in Montipora capitata

Genomic Location: Sc0000379:126388...135884
NR annotation: XP_029184708.2, tetratricopeptide repeat protein 39A-like isoform X5 [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A2ACP1Tetratricopeptide repeat protein 39A OS=Mus musculus OX=10090 GN=Ttc39a PE=2 SV=1
Q28DB0Tetratricopeptide repeat protein 39B OS=Xenopus tropicalis OX=8364 GN=ttc39b PE=2 SV=1
Q28D40Tetratricopeptide repeat protein 39A OS=Xenopus tropicalis OX=8364 GN=ttc39a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001963 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10300
all species →		Iml2-TPR_39Iml2/Tetratricopeptide repeat protein 39RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019412
all species →		FamilyInclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31859
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g12079.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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