Gene detail

Detailed information of g121.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: CAB3989449.1, Hypothetical predicted protein [Paramuricea clavata]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BP74	L-seryl-tRNA(Sec) kinase OS=Mus musculus OX=10090 GN=Pstk PE=1 SV=2
Q9Y673	Dolichyl-phosphate beta-glucosyltransferase OS=Homo sapiens OX=9606 GN=ALG5 PE=1 SV=1
Q9DB25	Dolichyl-phosphate beta-glucosyltransferase OS=Mus musculus OX=10090 GN=Alg5 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000421 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0000497 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0002152 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0002820 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0003317 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0005065 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0005764 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0006881 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0007118 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0009766 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0012673 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04193 all species →	PQ-loop	PQ loop repeat	Repeat	Interproscan
PF20146 all species →	NRF	Nose resistant-to-fluoxetine protein, N-terminal domain	Domain	Interproscan
PF00535 all species →	Glycos_transf_2	Glycosyl transferase family 2	Family	Interproscan
PF00787 all species →	PX	PX domain	Domain	Interproscan
PF10456 all species →	BAR_3_WASP_bdg	WASP-binding domain of Sorting nexin protein	Domain	Interproscan
PF00155 all species →	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan
PF08433 all species →	KTI12	Chromatin associated protein KTI12	Domain	Interproscan
PF03223 all species →	V-ATPase_C	V-ATPase subunit C	Family	Interproscan
PF01266 all species →	DAO	FAD dependent oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006603 all species →	Repeat	PQ-loop repeat	Interproscan
IPR005282 all species →	Family	Lysosomal cystine transporter	Interproscan
IPR006621 all species →	Domain	Nose resistant-to-fluoxetine protein, N-terminal	Interproscan
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR001173 all species →	Domain	Glycosyltransferase 2-like	Interproscan
IPR035518 all species →	Domain	Dolichyl-phosphate beta-glucosyltransferase	Interproscan
IPR036871 all species →	Homologous_superfamily	PX domain superfamily	Interproscan
IPR001683 all species →	Domain	Phox homology	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR019497 all species →	Domain	Sorting nexin protein, WASP-binding domain	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR004839 all species →	Domain	Aminotransferase, class I/classII	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR052648 all species →	Family	L-seryl-tRNA(Sec) kinase	Interproscan
IPR013641 all species →	Family	Protein KTI12/L-seryl-tRNA(Sec) kinase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR004907 all species →	Family	ATPase, V1 complex, subunit C	Interproscan
IPR036132 all species →	Homologous_superfamily	Vacuolar ATP synthase subunit C superfamily	Interproscan
IPR006076 all species →	Domain	FAD dependent oxidoreductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13131 all species →	CYSTINOSIN	Interproscan
PTHR10859 all species →	GLYCOSYL TRANSFERASE	Interproscan
PTHR45827 all species →	SORTING NEXIN	Interproscan
PTHR43510 all species →	AMINOTRANSFERASE FUNCTION, HYPOTHETICAL (EUROFUNG)	Interproscan
PTHR20873 all species →	L-SERYL-TRNA(SEC) KINASE	Interproscan
PTHR43104 all species →	L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005774 all species →	Cellular Component	vacuolar membrane	Interproscan
GO:0015184 all species →	Molecular Function	L-cystine transmembrane transporter activity	Interproscan
GO:0015811 all species →	Biological Process	L-cystine transport	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0031410 all species →	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0097320 all species →	Biological Process	plasma membrane tubulation	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0033180 all species →	Cellular Component	proton-transporting V-type ATPase, V1 domain	Interproscan
GO:0046961 all species →	Molecular Function	proton-transporting ATPase activity, rotational mechanism	Interproscan
GO:1902600 all species →	Biological Process	proton transmembrane transport	Interproscan
GO:0015078 all species →	Molecular Function	proton transmembrane transporter activity	Interproscan
GO:0047545 all species →	Molecular Function	2-hydroxyglutarate dehydrogenase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00729	ALG5; dolichyl-phosphate beta-glucosyltransferase	EC:2.4.1.117	Glycosyltransferases	ko01003	deepkoala
K04614	V1R; vomeronasal 1 receptor	-	G protein-coupled receptors	ko04030	deepkoala
K17923	SNX9_18_33; sorting nexin-9/18/33	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.