Gene detail

Detailed information of g1212.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_047135928.1, cytoplasmic dynein 2 intermediate chain 1-like isoform X2 [Hydra vulgaris]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q98ST7	DBH-like monooxygenase protein 1 OS=Gallus gallus OX=9031 GN=MOXD1 PE=2 SV=1
Q9CPW0	Contactin-associated protein-like 2 OS=Mus musculus OX=10090 GN=Cntnap2 PE=1 SV=2
Q5RD64	Contactin-associated protein-like 2 OS=Pongo abelii OX=9601 GN=CNTNAP2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000013 (this species only)
Orthogroup (gene family)	OG0000112 (this species only)
Orthogroup (gene family)	OG0000230 (this species only)
Orthogroup (gene family)	OG0000454 (this species only)
Orthogroup (gene family)	OG0003649 (this species only)
Orthogroup (gene family)	OG0004452 (this species only)
Orthogroup (gene family)	OG0007069 (this species only)
Orthogroup (gene family)	OG0015148 (this species only)
Orthogroup (gene family)	OG0020440 (this species only)
Orthogroup (gene family)	OG0036218 (this species only)
Orthogroup (gene family)	OG0059483 (this species only)
Orthogroup (gene family)	OG0171503 (this species only)
Orthogroup (gene family)	OG0171952 (this species only)
Orthogroup (gene family)	OG0172274 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan
PF00147 all species →	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan
PF00676 all species →	E1_dh	Dehydrogenase E1 component	Family	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF02931 all species →	Neur_chan_LBD	Neurotransmitter-gated ion-channel ligand binding domain	Family	Interproscan
PF03712 all species →	Cu2_monoox_C	Copper type II ascorbate-dependent monooxygenase, C-terminal domain	Domain	Interproscan
PF01082 all species →	Cu2_monooxygen	Copper type II ascorbate-dependent monooxygenase, N-terminal domain	Domain	Interproscan
PF03401 all species →	TctC	Tripartite tricarboxylate transporter family receptor	Family	Interproscan
PF01970 all species →	TctA	Tripartite tricarboxylate transporter TctA family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002077 all species →	Family	Voltage-dependent calcium channel, alpha-1 subunit	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR028823 all species →	Family	Sodium leak channel NALCN	Interproscan
IPR027359 all species →	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR002181 all species →	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR050373 all species →	Family	Fibrinogen C-terminal domain-containing protein	Interproscan
IPR036056 all species →	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR014716 all species →	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR029061 all species →	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan
IPR050642 all species →	Family	Pyruvate Dehydrogenase E1 Alpha Subunit	Interproscan
IPR001017 all species →	Domain	Dehydrogenase, E1 component	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR036734 all species →	Homologous_superfamily	Neurotransmitter-gated ion-channel ligand-binding domain superfamily	Interproscan
IPR006202 all species →	Domain	Neurotransmitter-gated ion-channel ligand-binding domain	Interproscan
IPR024548 all species →	Domain	Copper type II ascorbate-dependent monooxygenase, C-terminal	Interproscan
IPR045266 all species →	Domain	Copper-dependent monooxygenases, DOMON domain	Interproscan
IPR000323 all species →	Domain	Copper type II, ascorbate-dependent monooxygenase, N-terminal	Interproscan
IPR036939 all species →	Homologous_superfamily	Copper type II, ascorbate-dependent monooxygenase, N-terminal domain superfamily	Interproscan
IPR000945 all species →	Family	Dopamine beta-hydroxylase-like	Interproscan
IPR008977 all species →	Homologous_superfamily	PHM/PNGase F domain superfamily	Interproscan
IPR014784 all species →	Homologous_superfamily	Copper type II, ascorbate-dependent monooxygenase-like, C-terminal	Interproscan
IPR042100 all species →	Homologous_superfamily	Bordetella uptake gene, domain 1	Interproscan
IPR005064 all species →	Family	Bordetella uptake gene	Interproscan
IPR002823 all species →	Domain	Protein of unknown function DUF112, transmembrane	Interproscan
IPR042505 all species →	Family	Cytoplasmic dynein 2 intermediate chain 1	Interproscan
IPR003609 all species →	Domain	PAN/Apple domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46141 all species →	SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN	Interproscan
PTHR19143 all species →	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan
PTHR11516 all species →	PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR	Interproscan
PTHR45695 all species →	LEUCOKININ RECEPTOR-RELATED	Interproscan
PTHR10157 all species →	DOPAMINE BETA HYDROXYLASE RELATED	Interproscan
PTHR42928 all species →	TRICARBOXYLATE-BINDING PROTEIN	Interproscan
PTHR16022 all species →	WD REPEAT DOMAIN 60	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005245 all species →	Molecular Function	voltage-gated calcium channel activity	Interproscan
GO:0005891 all species →	Cellular Component	voltage-gated calcium channel complex	Interproscan
GO:0070588 all species →	Biological Process	calcium ion transmembrane transport	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005261 all species →	Molecular Function	monoatomic cation channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0032224 all species →	Biological Process	positive regulation of synaptic transmission, cholinergic	Interproscan
GO:0032230 all species →	Biological Process	positive regulation of synaptic transmission, GABAergic	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0062023 all species →	Cellular Component	collagen-containing extracellular matrix	Interproscan
GO:0004739 all species →	Molecular Function	pyruvate dehydrogenase (acetyl-transferring) activity	Interproscan
GO:0006086 all species →	Biological Process	acetyl-CoA biosynthetic process from pyruvate	Interproscan
GO:0016624 all species →	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005230 all species →	Molecular Function	extracellular ligand-gated monoatomic ion channel activity	Interproscan
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005507 all species →	Molecular Function	copper ion binding	Interproscan
GO:0016715 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	Interproscan
GO:0004500 all species →	Molecular Function	dopamine beta-monooxygenase activity	Interproscan
GO:0006589 all species →	Biological Process	octopamine biosynthetic process	Interproscan
GO:0030667 all species →	Cellular Component	secretory granule membrane	Interproscan
GO:0042420 all species →	Biological Process	dopamine catabolic process	Interproscan
GO:0042421 all species →	Biological Process	norepinephrine biosynthetic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005868 all species →	Cellular Component	cytoplasmic dynein complex	Interproscan
GO:0042073 all species →	Biological Process	intraciliary transport	Interproscan
GO:0045503 all species →	Molecular Function	dynein light chain binding	Interproscan
GO:0045504 all species →	Molecular Function	dynein heavy chain binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00161	PDHA, pdhA; pyruvate dehydrogenase E1 component subunit alpha	EC:1.2.4.1	Diabetic cardiomyopathy	ko05415	deepkoala
K21863	NALCN; sodium leak channel non-selective protein	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.