Gene detail

Detailed information of g12128.t1.1 in Haliclystus octoradiatus

Genomic Location: not available for this species
NR annotation: XP_046864972.1, PAS domain-containing serine/threonine-protein kinase-like isoform X2 [Xenia sp. Carnegie-2017]
Species abbreviation HOCTO · all data for this species · gene families

Sequence

CDS

g12128.t1

ATGCTCAGTTTATCATTACCTGCATCAGTGTTCTCTACACAGAATACCATGGATTCATCTAAAGCTATGAGTTGTGCTTTGCGAAGACAAATCGACCGCTTAAATCGTTCAGATCAGAATTTTGCTGGCTCGCTCACAGGCCTAGAAGATAATGTACCAAAGAAACACAAAGAAGATAACAGTCAATCAATTGATGTTGAAGGTTTGACAAAGGCAGTAGACAGCTTCAGTTTCTCTTCTCCGTGTTCTATGCCTGCTTTAAATTCATCTTTTGGAAATCTAACATCGACTTCATTGAACGCTTCAACACAGTTGTTCAGTTTGCTTGCCAATTCAAAAGACCATGCTGCTTACTCAGATTCGTTAAAGCATTCCaGCCGTGCTACCTTCACCATAACAGCACATTCATCAAGTATCCGTGTTGCTAATGACATTGCTAGTAAATTATTTGGATTTGATCCAAACGAATTAATTGGAAAACGATTGACAACTCTATTGCACTTCCCTCATAGTgctaaacattttgattttgagaaTGACCTTCTTGATCGTGatggaaataaaattgttGTCTCCGGTCGCATTgctgaaggaatttcaaaatcaagtgAACGATTTCCAGTATCTGTCTGGATGAAACGACTTGTAGATGACGAAGATTCTAGCTGCATTGTTGTGTTGGAGCCTGTGCAGCGCAACACAACTACATTTGCATACGACAAGGAATTGAATATCAAAAGCTGTGATGAAGAGCTTGCACTATTGATTGGTTACAGAAATGCAACGGAGGTTGTTGATTCAAAAGTTACACAAATCATTCCCCAGTTCAATGACATTCTCAGTACTTATCAGCATCTCGAAGAGAGTGCACCTAACCCTTGCACATGTTTAACAAAGGCATCAAAATCAATTCCTATAATGCTCGATTTTGATAGAAGTCCACAGTCATTCGATGTCGGTATTGTTCATATCTATTCGAATATATCGGGTTTGCTGACAGCTGACGTTAATGGTAATATAATTAGTGGTAATGCTACGTTTCTTACAATGCTGTTTGGTTATGCAGAGAGGGACATTCAAGGCAAGCACATCAGTCAGCTGATTCCTCATCTACTCAATGACATTGACCAACAAATTAGTCCATCTTTAAATCGATCCATTGACAAAGTTTTCGACTGTAACCAAAACGATGAAGAAAAACAAGAACAGTTCAACGATAATAGCTTTAAAGGTGAGATGATCATCACCAGTTCACTGGAATCTAGTGCCACGGCGTCAGAAGGAAGCTGCACAACAATTAGTTCCCACAAAGTTGAAGCCCAATCCCCTAACGCAATTGAAAATTCAAGGAGTAGCAATGACAGTGGAATCCTTGTTGTCCGTGACAGCAATTCGTCCCGTGATAACGAAGAGAGACAATTTCCAGACTCGGATGTCTCCACGCCAACCGAGACAATCGGTGACATCGTTACCAGAGGACCAGTACAAGCATCGACACCTAATCGCTCAGATAATTCAACACCGTCTCGTCGGAGAGTGCTACGATCTAGACAAGAGTCATTTAAGCTTATTGATGGTCTGTTTACGAGTATGGCGAGGCATAGAGATGGTGGATGGTTCCCAATCTTAATTGAGGTTAAACATGTGGTGTTCAATGGTAACCGTCAGTTGTACTGTCTATGGATATCTCGATTGATTGATTATAACGAAAGTCGTCACCAAGCTATATCTGACCACAGTCGACATTCGTCCCAAGGAACGTCTCTAGGTAGCAATATCAACCACTCACAATACGCCCCTGCAGAAGAGCAGGAATTACGTAACGCCTACGAAGAGCAGCTCATTTCTGGATCTTTCAATGACGAATATGATGTAATTGCAACCATTGGCGCAGGCGCGTTTGGTGTTGTAAAATCTGCAAGACGAAGAGCTGACCAGTTACCGgtTGTTGTAAAGttcatattaaaatgtgaCATCGCACGCACTAGTCTGATTGACCATCCTGAACTGGGTGTTATCCCTAAGGAAGTGGCTGTTGTTTCACAATTGCTCCATCCAAATATAATACAAATGATTGATCTTCATGAAAATGACACTTGCTATCATATGATCATGGCTGACCATGgagattgttttgatttgtttgcaTTCGTTGAGAAGAAGCCTCTCTTGGATGAGCCTCTTACTAGCTACATGTTCAGACAGATTGTTGCTGGTGTATCGTATTTACATTCAAAGAACTTTTTGCATCGTGACATCAAGGATGAGAATGTCATCATCAATCGAAACTTCCATCTTAAACTCATTGATTTTGGTTCTGTTGTCCACATGGAAGAAGCCCCCTTGTGCCATGGGTTCTGTGGTACCATGGAATACTGTTCCCCAGAAGTACTACTTGGTTTGGCGTATCAAGGTGTTGAAGCAGAAGTATGGGCCTTAGGGGTCACCTTGTACATTTTGGCATTTGGATATAATCCATTTTTCGATGTTGATGATATCCCAAAAGCAAAACTAGAGATTCCATTTTCTGTGTCTGATGATTTGATGATGTTACTTAAAGCAATGCTGCAGAAGAGTCCTAAAAAGCGACCTAGCATTGATGAGATTGAAAATAACCCTTGGATTAAAATGCCTGTTGAAATCAACAATTACCCATACGAAGTAGTCGTTCCTCCTCCCGTGATCGAGATTGATTCAGATGGCAGCACCGAAAGTGATAATGAGGCTGACCTGGAAACGAGTCGATTGTATTACGAAGATGATCAGAACATATTAGAAGAagattatcaaaaatatttaagcagtttacatttttatagtGGCGATGATTtagaaaataacaaatcaaacgAGAACTCATCATCAATTCACATAAACGAATTGTTCTACTAG

Transcript

g12128.t1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8CEE6	PAS domain-containing serine/threonine-protein kinase OS=Mus musculus OX=10090 GN=Pask PE=1 SV=3
Q96RG2	PAS domain-containing serine/threonine-protein kinase OS=Homo sapiens OX=9606 GN=PASK PE=1 SV=3
P31374	Serine/threonine-protein kinase PSK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PSK1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005500 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13426 all species →	PAS_9	PAS domain	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000014 all species →	Domain	PAS domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR035965 all species →	Homologous_superfamily	PAS domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24346 all species →	MAP/MICROTUBULE AFFINITY-REGULATING KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0045719 all species →	Biological Process	negative regulation of glycogen biosynthetic process	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08801	PASK; PAS domain containing serine/threonine kinase	EC:2.7.11.1	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.