Detailed information of g1216.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047131190.1, uncharacterized protein LOC124805807 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
Q9NYQ7Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens OX=9606 GN=CELSR3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF13895Ig_2Immunoglobulin domainDomainInterproscan
PF00709Adenylsucc_syntAdenylosuccinate synthetaseDomainInterproscan
PF00025ArfADP-ribosylation factor familyDomainInterproscan
PF01803LIM_bindLIM-domain binding proteinFamilyInterproscan
PF17916LIDLIM interaction domain (LID)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR050971FamilyCadherin domain-containing proteinInterproscan
IPR008983Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001114FamilyAdenylosuccinate synthetaseInterproscan
IPR042110Homologous_superfamilyAdenylosuccinate synthetase, domain 2Interproscan
IPR042111Homologous_superfamilyAdenylosuccinate synthetase, domain 3Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR042109Homologous_superfamilyAdenylosuccinate synthetase, domain 1Interproscan
IPR045197FamilyNuclear pore membrane glycoprotein 210-likeInterproscan
IPR008964Homologous_superfamilyInvasin/intimin cell-adhesion fragmentsInterproscan
IPR006689FamilySmall GTPase superfamily, ARF/SAR typeInterproscan
IPR029005FamilyLIM-domain binding protein/SEUSSInterproscan
IPR041363DomainLIM interaction domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24025DESMOGLEIN FAMILY MEMBERInterproscan
PTHR11846ADENYLOSUCCINATE SYNTHETASEInterproscan
PTHR23019NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46688ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 16Interproscan
PTHR10378LIM DOMAIN-BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004019Molecular Functionadenylosuccinate synthase activityInterproscan
GO:0006164Biological Processpurine nucleotide biosynthetic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0044208Biological Process'de novo' AMP biosynthetic processInterproscan
GO:0046040Biological ProcessIMP metabolic processInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0007399Biological Processnervous system developmentInterproscan
GO:0030274Molecular FunctionLIM domain bindingInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24143LDB2; LIM domain-binding protein 2-Alanine, aspartate and glutamate metabolismko00250deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala

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