Detailed information of g12170.t1 in Acropora digitifera

Genomic Location: chr5Alt:29954775...29959130
NR annotation: XP_015751151.1, PREDICTED: protein boule-like isoform X1 [Acropora digitifera]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O57437Deleted in azoospermia-like-A OS=Xenopus laevis OX=8355 GN=dazl-a PE=1 SV=1
Q4V7Y4Deleted in azoospermia-like-B OS=Xenopus laevis OX=8355 GN=dazl-b PE=2 SV=2
Q76CY5Deleted in azoospermia-like OS=Xenopus tropicalis OX=8364 GN=dazl PE=2 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000504
all species →
DomainRNA recognition motif domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11176
all species →
BOULE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0003730
all species →
Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0008494
all species →
Molecular Functiontranslation activator activityInterproscan
GO:0045948
all species →
Biological Processpositive regulation of translational initiationInterproscan
GO:0070935
all species →
Biological Process3'-UTR-mediated mRNA stabilizationInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g12170.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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