Gene detail

Detailed information of g12178.t2.1 in Blastomussa wellsi

Genomic Location: :...
NR annotation: XP_020627509.1, tip elongation aberrant protein 1-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

g12178.t2

ATGGGCCAAGACGTCGCGAAACAAGTTCAATTTAAAGCAAACAGCGTGGATTCAAGTAATTCTACGGCTTATGCACCGTTACCAAAACAGTTATACAAGAAAAGCCCATCATTAAACAGATATAGTGAAGTTCAAAGCATGGTCCGTGTCTATAATAACCTTGCAGCTCTTTCTCCCAGAGACAAGCACATTGACAGAAATACATTCATGCATTATTTTCCTTTGGATGGAGTTCTGGCAGAGAGATTGTTTACAGCATTTGACAAAGACAGAAATGGTCATATTGACCTTGATGAGTTTTTAGGTGGACTTGCTTTGTGTTTAAGAGGCTCAACTGAAGAAAGAGGACAGATCATCTTTGACATGTTTAGTCATGAAGTACGCGAAGGGTCAAGAACAGATGGACTCAGTATTTCTGAGATTAGTATCATGCTGAAGTCAGTACTGTCTGCCGCAGCGAGAATTATCCATGTCAGAGAAGGCCAGTCTCAAGATGGCGTCGAGTGTTTGGAACTGTTAGAAGTGGACAGTGCTGTAGATAACTTTGTCCGAGATGCCACCAGGCAGTGTGAGGACAGTAATAAGTGGCGTGAGAATGGAAAGCTGACCAAGGCAGAGTTTGTAAGCTGGATGAGAAGACATCCTCTCATTGTGGACTCGGTATTCCAGCACTCCAGTATTAAAGACAAACAGTTTAACGCAGGCTCGCAGCATGATCTTGTTCAAGAAAGTCACAGGCCACCTGGTTTTGTCACCACTACACAACAAGGAACACGACGCACAGAGCTGTTAAGCCAGACGTGGGTCGATGGCTTACAACAAGGTGCAGAGGAGGAACAGGCTGCTAATGAGCCCGTGTTCAGTGGTAGTTATGCAGATGCCGATTACCTGTGGAGCCCAGTCTTCCCTGCCAGCCTGAGCATGCCTTGCGCGCGTAACAGACACTCAGTATGTGTTTGGGGTGGAGGTGTGTTCGTATATGGAGGCCGAGGGACCAGGGGAACTCTTAAAGATTTTTGGAGATACGATATCGCCTCGAACATGTGGAATAACGTTCCTGTTGAAGGCGACTTCAGACCACCGTCCCTGCAGGAGCATACTGCATTAACTTACAAGGGTAACATGTATGTATTCGGAGGAGAATTTACTGCAACAAACGAGACTCCATTATGGACTTTCAATTTTCGTGCTCGTGTGTGGAGAAAGCAACCAGCTAAAACGTGGGGCCCAGGGACACGCCGGTCACACACGACTGTGATCCACGAGACTTCGATGTTCGTGTTTGGAGGGTATATCGACATGAGAGGTGGGAGCGACGAGCTATGGCAGTACGAGTTTGACACTTCAAAATGGATCAGAATCAAGTGGAAAGGAGAAGGACCTAGCCCGCGGTACAGTCACTCAGCGGCCGTTGGAGCCGCTGGGATGTGGGTGTATGGAGGCTTGGAAGGTCTACAGGCCAGGAACGATCTCTGGAGATGGAGCTTTGTGAGTCACTCGTGGTCGAGGATAAAGAGTCGAGGGGGTCCGCCGGCCTTGTTTGGCCATTCTGCAATTAAGGTTGGAGATGGCATGTTAATATTTGGAGGTGAAACAACCGACGGTGCTTTACACAATACCATGTGGCGGTTTGATTTAGGGAATCGCAGTTGGAGCACTGTTCGCCCGCGGGGCGGGATATCCCCGCCGGTCCGTAGCTGTTTCTCCGAGGGGGTAGTCTCTTCATCCGCTTTCCTCCCATCCATCCGACCGTCAACTTCTCACTCTGCCCCGCCCTGTACCCCTATGCCGTCGGGCCTCCTGAGAGAAGAGAGTCATGAAAGCAGGCCGAACACCAGGGTGAAGTCTTGGTGTGATCCCGTCACCCAGTGGGGAGTGTCTGCGGCGTCGCTTGCATCACTTGATTCAATGGCGCCGCTACCAAGCTCGGGATTAAAATTCAGCGACGTTAAACACACAGAGTCCATTTTTAGCGCAGAGATATATGAGAACTCTAAAGGGATGACTCTGTCGGACGACTCCCTAAACGGGCAGGAAAGCCATAGTTCCACACGCAATCAGTTGAGACCTGGGACTGGTGCCCATGCTCCTCCCGGTGTAGCGCGGGACAAGAAAGGCCGAGTTCATAGCCAAGAACTTTTGAGTTACAATTCCCATTTAAGCGCAGATTTGAGGAAAAGTTTGACTCATCCTATCGCCTGCTTGTTAGTTCTTGGCGGGAAGACTCGCGCCCAGGCAGATATGGGAAGAAGCCTCGACATATGGAGGTGTGATATTGATCCAGTCAAGAAAACCCAAACGGAGCGAGTGGAAAAAATTAACGTGGCGACTTCTGCTGCGACAGTCAACCGGGCGACCGCGCCTTCTGGCGTTCGCTACAGTCATTTGGAGCGTGGTCCTTCCGAGAGCACCGCTGACCCTGATGACATGGACACTGGATCATTAGGCAGTGACTTGGTCTTGGCAGACATGTCTGATAGCGACACTCGCAGTCTAGATTTCTTATTGGACGACTACGGCTGCGTCGACACGTCACGTGGCTTTCCCAAAGTGTCGGTGTGA

Transcript

g12178.t2

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07646	Kelch_2	Kelch motif	Repeat	Interproscan
PF13415	Kelch_3	Galactose oxidase, central domain	Repeat	Interproscan
PF13418	Kelch_4	Galactose oxidase, central domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011498	Repeat	Kelch repeat type 2	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR011043	Homologous_superfamily	Galactose oxidase/kelch, beta-propeller	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46093	ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan