Detailed information of g1218.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CFW93854.1, partial mRNA for homeobox transcription factor Six 3-6 (six 3-6 gene), partial [Aurelia aurita]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O73916Homeobox protein SIX3 OS=Oryzias latipes OX=8090 GN=six3 PE=1 SV=1
O93307Homeobox protein SIX6 OS=Gallus gallus OX=9031 GN=SIX6 PE=2 SV=1
O95475Homeobox protein SIX6 OS=Homo sapiens OX=9606 GN=SIX6 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00378ECH_1Enoyl-CoA hydratase/isomeraseDomainInterproscan
PF00887ACBPAcyl CoA binding proteinDomainInterproscan
PF02882THF_DHG_CYH_CTetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domainDomainInterproscan
PF00743FMO-likeFlavin-binding monooxygenase-likeFamilyInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan
PF16878SIX1_SDTranscriptional regulator, SIX1, N-terminal SD domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF05041Pecanex_CPecanex protein (C-terminus)FamilyInterproscan
PF00106adh_shortshort chain dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029045Homologous_superfamilyClpP/crotonase-like domain superfamilyInterproscan
IPR051053FamilyEnoyl-CoA hydratase/isomerase and chromodomain-containing proteinInterproscan
IPR035984Homologous_superfamilyAcyl-CoA binding protein superfamilyInterproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR022408Conserved_siteAcyl-CoA-binding protein, ACBP, conserved siteInterproscan
IPR000582DomainAcyl-CoA-binding protein, ACBPInterproscan
IPR014748Homologous_superfamilyEnoyl-CoA hydratase, C-terminalInterproscan
IPR001753FamilyEnoyl-CoA hydratase/isomeraseInterproscan
IPR020631DomainTetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domainInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR020946FamilyFlavin monooxygenase-likeInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR050346FamilyFlavin-containing MonooxygenasesInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR031701DomainHomeobox protein SIX1, N-terminal SD domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR051226FamilyProtein Phosphatase 1 Regulatory SubunitInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR039797FamilyProtein PecanexInterproscan
IPR007735DomainPecanex, C-terminalInterproscan
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR43684-Interproscan
PTHR48099C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATEDInterproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23023DIMETHYLANILINE MONOOXYGENASEInterproscan
PTHR10390HOMEOBOX PROTEIN SIXInterproscan
PTHR24179PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12Interproscan
PTHR12372PECANEXInterproscan
PTHR43313SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9CInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000062Molecular Functionfatty-acyl-CoA bindingInterproscan
GO:0004477Molecular Functionmethenyltetrahydrofolate cyclohydrolase activityInterproscan
GO:0004488Molecular Functionmethylenetetrahydrofolate dehydrogenase (NADP+) activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0035999Biological Processtetrahydrofolate interconversionInterproscan
GO:0004499Molecular FunctionN,N-dimethylaniline monooxygenase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004857Molecular Functionenzyme inhibitor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0019208Molecular Functionphosphatase regulator activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0008202Biological Processsteroid metabolic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13239ECI2, PECI; Delta3-Delta2-enoyl-CoA isomeraseEC:5.3.3.8
Peroxisomeko04146deepkoala

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