Genomic Location: not available for this species
NR annotation: CAH3171996.1, unnamed protein product [Porites lobata]
Species Calvadosia cruxmelitensis · all data for this species · gene families
| UniProt accession | Description |
|---|---|
| P49754 | Vacuolar protein sorting-associated protein 41 homolog OS=Homo sapiens OX=9606 GN=VPS41 PE=1 SV=3 |
| Q5KU39 | Vacuolar protein sorting-associated protein 41 homolog OS=Mus musculus OX=10090 GN=Vps41 PE=1 SV=1 |
| E7F590 | Vacuolar protein sorting-associated protein 41 homolog OS=Danio rerio OX=7955 GN=vps41 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000002 (this species only) |
| Orthogroup (gene family) | OG0000431 (this species only) |
| Orthogroup (gene family) | OG0004220 (this species only) |
| Orthogroup (gene family) | OG0005379 (this species only) |
| Orthogroup (gene family) | OG0007303 (this species only) |
| Orthogroup (gene family) | OG0017421 (this species only) |
| Orthogroup (gene family) | OG0018107 (this species only) |
| Orthogroup (gene family) | OG0019081 (this species only) |
| Orthogroup (gene family) | OG0035809 (this species only) |
| Orthogroup (gene family) | OG0080478 (this species only) |
| Orthogroup (gene family) | OG0170729 (this species only) |
| Orthogroup (gene family) | OG0171324 (this species only) |
| Orthogroup (gene family) | OG0171665 (this species only) |
| Orthogroup (gene family) | OG0174225 (this species only) |
| Transcription factor family | zf-BED · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 all species → | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF17919 all species → | RT_RNaseH_2 | RNase H-like domain found in reverse transcriptase | Domain | Interproscan |
| PF00090 all species → | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| PF06978 all species → | POP1_N | Ribonucleases P/MRP protein subunit POP1, N-terminal | Domain | Interproscan |
| PF18293 all species → | Caprin-1_dimer | Caprin-1 dimerization domain | Domain | Interproscan |
| PF02892 all species → | zf-BED | BED zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR043128 all species → | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR000477 all species → | Domain | Reverse transcriptase domain | Interproscan |
| IPR041577 all species → | Domain | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain | Interproscan |
| IPR050951 all species → | Family | Retrovirus-related Pol polyprotein | Interproscan |
| IPR043502 all species → | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR036383 all species → | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR000884 all species → | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR052065 all species → | Family | Complement and asymmetry regulator | Interproscan |
| IPR009723 all species → | Domain | Pop1, N-terminal | Interproscan |
| IPR039182 all species → | Family | Ribonucleases P/MRP protein subunit Pop1 | Interproscan |
| IPR028816 all species → | Family | Caprin | Interproscan |
| IPR041637 all species → | Domain | Caprin-1 dimerization domain | Interproscan |
| IPR045111 all species → | Family | Vacuolar protein sorting-associated protein Vps41/Vps8 | Interproscan |
| IPR036236 all species → | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR003656 all species → | Domain | Zinc finger, BED-type | Interproscan |
| IPR052717 all species → | Family | Vacuolar processing and transposase activity regulators | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR37984 all species → | PROTEIN CBG26694 | Interproscan |
| PTHR22906 all species → | PROPERDIN | Interproscan |
| PTHR22731 all species → | RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 | Interproscan |
| PTHR22922 all species → | GPI-ANCHORED PROTEIN P137 | Interproscan |
| PTHR12616 all species → | VACUOLAR PROTEIN SORTING VPS41 | Interproscan |
| PTHR46169 all species → | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000172 all species → | Cellular Component | ribonuclease MRP complex | Interproscan |
| GO:0001682 all species → | Biological Process | tRNA 5'-leader removal | Interproscan |
| GO:0005655 all species → | Cellular Component | nucleolar ribonuclease P complex | Interproscan |
| GO:0008033 all species → | Biological Process | tRNA processing | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005770 all species → | Cellular Component | late endosome | Interproscan |
| GO:0006623 all species → | Biological Process | protein targeting to vacuole | Interproscan |
| GO:0009267 all species → | Biological Process | cellular response to starvation | Interproscan |
| GO:0016236 all species → | Biological Process | macroautophagy | Interproscan |
| GO:0030897 all species → | Cellular Component | HOPS complex | Interproscan |
| GO:0034058 all species → | Biological Process | endosomal vesicle fusion | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
g1220.t1.
