Detailed information of g1221.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_048239142.1, pseudouridylate synthase 7 homolog [Haliotis rufescens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q96PZ0Pseudouridylate synthase 7 homolog OS=Homo sapiens OX=9606 GN=PUS7 PE=1 SV=2
Q08DI8Pseudouridylate synthase 7 homolog OS=Bos taurus OX=9913 GN=PUS7 PE=2 SV=1
Q91VU7Pseudouridylate synthase 7 homolog OS=Mus musculus OX=10090 GN=Pus7 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan
PF00611FCHFes/CIP4, and EFC/F-BAR homology domainFamilyInterproscan
PF04721PAWPNGase C-terminal domain, mannose-binding module PAWDomainInterproscan
PF01142TruDtRNA pseudouridine synthase D (TruD)FamilyInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF136402OG-FeII_Oxy_32OG-Fe(II) oxygenase superfamilyDomainInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF03029ATP_bind_1Conserved hypothetical ATP binding proteinDomainInterproscan
PF03067LPMO_10Lytic polysaccharide mono-oxygenase, cellulose-degradingDomainInterproscan
PF08457Sfi1Sfi1 spindle body proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR001060DomainFCH domainInterproscan
IPR031160DomainF-BAR domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR038680Homologous_superfamilyPAW domain superfamilyInterproscan
IPR006588DomainPeptide N glycanase, PAW domainInterproscan
IPR001656FamilyPseudouridine synthase, TruDInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR020119Conserved_sitePseudouridine synthase TruD, conserved siteInterproscan
IPR042214Homologous_superfamilyPseudouridine synthase, TruD, catalytic domainInterproscan
IPR011760DomainPseudouridine synthase, TruD, insertion domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR006620DomainProlyl 4-hydroxylase, alpha subunitInterproscan
IPR005123DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR044862DomainProlyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domainInterproscan
IPR045054FamilyProlyl 4-hydroxylaseInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR049680FamilySolute carrier family 49-likeInterproscan
IPR004130FamilyGPN-loop GTPaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004302DomainCellulose/chitin-binding protein, N-terminalInterproscan
IPR013665DomainSfi1 spindle bodyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23065PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1Interproscan
PTHR13326TRNA PSEUDOURIDINE SYNTHASE DInterproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan
PTHR10869PROLYL 4-HYDROXYLASE ALPHA SUBUNITInterproscan
PTHR10924MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATEDInterproscan
PTHR21231XPA-BINDING PROTEIN 1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005543Molecular Functionphospholipid bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007010Biological Processcytoskeleton organizationInterproscan
GO:0030100Biological Processregulation of endocytosisInterproscan
GO:0097320Biological Processplasma membrane tubulationInterproscan
GO:0006516Biological Processglycoprotein catabolic processInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0031418Molecular FunctionL-ascorbic acid bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0004656Molecular Functionprocollagen-proline 4-dioxygenase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0018401Biological Processpeptidyl-proline hydroxylation to 4-hydroxy-L-prolineInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0015232Molecular Functionheme transmembrane transporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0051184Molecular Functionobsolete cofactor transmembrane transporter activityInterproscan
GO:0097037Biological Processheme exportInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06711PH-4; hypoxia-inducible factor prolyl 4-hydroxylaseEC:1.14.11.-
Transfer RNA biogenesisko03016deepkoala
Membrane traffickingko04131deepkoala
Chromosome and associated proteinsko03036deepkoala
Transportersko02000deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala

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