Detailed information of g1225.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047138233.1, dnaJ homolog subfamily C member 13 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O75165DnaJ homolog subfamily C member 13 OS=Homo sapiens OX=9606 GN=DNAJC13 PE=1 SV=5
F4IVL6DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana OX=3702 GN=GRV2 PE=1 SV=1
Q5F5M1Chaperone protein DnaJ OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) OX=242231 GN=dnaJ PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF02833DHHA2DHHA2 domainFamilyInterproscan
PF13716CRAL_TRIO_2Divergent CRAL/TRIO domainDomainInterproscan
PF00022ActinActinFamilyInterproscan
PF00626GelsolinGelsolin repeatDomainInterproscan
PF02209VHPVillin headpiece domainDomainInterproscan
PF00226DnaJDnaJ domainDomainInterproscan
PF19432RME-8_NDNAJ protein RME-8 N-terminalDomainInterproscan
PF14237GYF_2GYF domain 2DomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF03948Ribosomal_L9_CRibosomal protein L9, C-terminal domainDomainInterproscan
PF01281Ribosomal_L9_NRibosomal protein L9, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR050283FamilyE-box Binding Transcriptional RegulatorsInterproscan
IPR038222Homologous_superfamilyDHHA2 domain superfamilyInterproscan
IPR004097DomainDHHA2 domainInterproscan
IPR001251DomainCRAL-TRIO lipid binding domainInterproscan
IPR036865Homologous_superfamilyCRAL-TRIO lipid binding domain superfamilyInterproscan
IPR038763Homologous_superfamilyDHH phosphoesterase superfamilyInterproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR004000FamilyActin familyInterproscan
IPR029006Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan
IPR007122FamilyVillin/GelsolinInterproscan
IPR007123DomainGelsolin-like domainInterproscan
IPR036886Homologous_superfamilyVillin headpiece domain superfamilyInterproscan
IPR003128DomainVillin headpieceInterproscan
IPR036869Homologous_superfamilyChaperone J-domain superfamilyInterproscan
IPR001623DomainDnaJ domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR044978FamilyDnaJ homologue subfamily C, GRV2/DNAJC13Interproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR045802DomainDnaJ homologue subfamily C, GRV2/DNAJC13, N-terminal domainInterproscan
IPR025640DomainGYF domain 2Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR006028FamilyGamma-aminobutyric acid A receptor/Glycine receptor alphaInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR036791Homologous_superfamilyLarge ribosomal subunit protein bL9, C-terminal domain superfamilyInterproscan
IPR036935Homologous_superfamilyLarge ribosomal subunit protein bL9, N-terminal domain superfamilyInterproscan
IPR000244FamilyLarge ribosomal subunit protein bL9Interproscan
IPR020069DomainLarge ribosomal subunit protein bL9, C-terminalInterproscan
IPR020070DomainLarge ribosomal subunit protein bL9, N-terminalInterproscan
IPR009027Homologous_superfamilyLarge ribosomal subunit protein bL9/RNase H1, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscan
PTHR12112BNIP - RELATEDInterproscan
PTHR39299-Interproscan
PTHR11977VILLINInterproscan
PTHR36983DNAJ HOMOLOG SUBFAMILY C MEMBER 13Interproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR2136850S RIBOSOMAL PROTEIN L9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032502Biological Processdevelopmental processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016462Molecular Functionpyrophosphatase activityInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0007010Biological Processcytoskeleton organizationInterproscan
GO:0005546Molecular Functionphosphatidylinositol-4,5-bisphosphate bindingInterproscan
GO:0008154Biological Processactin polymerization or depolymerizationInterproscan
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0051014Biological Processactin filament severingInterproscan
GO:0051016Biological Processbarbed-end actin filament cappingInterproscan
GO:0006898Biological Processreceptor-mediated endocytosisInterproscan
GO:0007032Biological Processendosome organizationInterproscan
GO:0010008Cellular Componentendosome membraneInterproscan
GO:2000641Biological Processregulation of early endosome to late endosome transportInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02939RP-L9, MRPL9, rplI; large subunit ribosomal protein L9-Chaperones and folding catalystsko03110deepkoala
Cytoskeleton proteinsko04812deepkoala
Ribosomeko03011deepkoala

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