Detailed information of g1229.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020895180.1, 26S proteasome non-ATPase regulatory subunit 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3TXS726S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus OX=10090 GN=Psmd1 PE=1 SV=1
Q5F41826S proteasome non-ATPase regulatory subunit 1 OS=Gallus gallus OX=9031 GN=PSMD1 PE=2 SV=1
Q9946026S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens OX=9606 GN=PSMD1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00069PkinaseProtein kinase domainDomainInterproscan
PF00149MetallophosCalcineurin-like phosphoesteraseDomainInterproscan
PF16891STPPase_NSerine-threonine protein phosphatase N-terminal domainFamilyInterproscan
PF04997RNA_pol_Rpb1_1RNA polymerase Rpb1, domain 1DomainInterproscan
PF00623RNA_pol_Rpb1_2RNA polymerase Rpb1, domain 2DomainInterproscan
PF04990RNA_pol_Rpb1_7RNA polymerase Rpb1, domain 7DomainInterproscan
PF04983RNA_pol_Rpb1_3RNA polymerase Rpb1, domain 3DomainInterproscan
PF04992RNA_pol_Rpb1_6RNA polymerase Rpb1, domain 6DomainInterproscan
PF05000RNA_pol_Rpb1_4RNA polymerase Rpb1, domain 4DomainInterproscan
PF04998RNA_pol_Rpb1_5RNA polymerase Rpb1, domain 5DomainInterproscan
PF00667FAD_binding_1FAD binding domainDomainInterproscan
PF00258Flavodoxin_1FlavodoxinDomainInterproscan
PF00175NAD_binding_1Oxidoreductase NAD-binding domain DomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF00916Sulfate_transpSulfate permease familyFamilyInterproscan
PF01740STASSTAS domainDomainInterproscan
PF13646HEAT_2HEAT repeatsRepeatInterproscan
PF21505RPN2_N26S proteasome subunit RPN2, N-terminal domainDomainInterproscan
PF18004RPN2_C26S proteasome regulatory subunit RPN2 C-terminal domainDomainInterproscan
PF01851PC_repProteasome/cyclosome repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR051511FamilyMitochondrial Quality Control and Scaffold KinasesInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR029052Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan
IPR006186DomainSerine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphataseInterproscan
IPR004843DomainCalcineurin-like phosphoesterase domain, ApaH typeInterproscan
IPR050341FamilySerine/threonine-protein phosphatase PP1 catalytic subunitInterproscan
IPR031675DomainSerine-threonine protein phosphatase, N-terminalInterproscan
IPR007080DomainRNA polymerase Rpb1, domain 1Interproscan
IPR000722DomainRNA polymerase, alpha subunitInterproscan
IPR042102Homologous_superfamilyRNA polymerase Rpb1, domain 3 superfamilyInterproscan
IPR044893Homologous_superfamilyRNA polymerase Rpb1, clamp domain superfamilyInterproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR038593Homologous_superfamilyRNA polymerase Rpb1, domain 7 superfamilyInterproscan
IPR007073DomainRNA polymerase Rpb1, domain 7Interproscan
IPR007066DomainRNA polymerase Rpb1, domain 3Interproscan
IPR038120Homologous_superfamilyRNA polymerase Rpb1, funnel domain superfamilyInterproscan
IPR006592DomainRNA polymerase, N-terminalInterproscan
IPR007075DomainRNA polymerase Rpb1, domain 6Interproscan
IPR007083DomainRNA polymerase Rpb1, domain 4Interproscan
IPR007081DomainRNA polymerase Rpb1, domain 5Interproscan
IPR039261Homologous_superfamilyFerredoxin-NADP reductase (FNR), nucleotide-binding domainInterproscan
IPR017927DomainFAD-binding domain, ferredoxin reductase-typeInterproscan
IPR008254DomainFlavodoxin/nitric oxide synthaseInterproscan
IPR003097DomainSulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-bindingInterproscan
IPR001709DomainFlavoprotein pyridine nucleotide cytochrome reductaseInterproscan
IPR001094DomainFlavodoxin-likeInterproscan
IPR029039Homologous_superfamilyFlavoprotein-like superfamilyInterproscan
IPR001433DomainOxidoreductase FAD/NAD(P)-bindingInterproscan
IPR017938Homologous_superfamilyRiboflavin synthase-like beta-barrelInterproscan
IPR023173Homologous_superfamilyNADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamilyInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR035992Homologous_superfamilyRicin B-like lectinsInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036513Homologous_superfamilySTAS domain superfamilyInterproscan
IPR011547DomainSLC26A/SulP transporter domainInterproscan
IPR002645DomainSTAS domainInterproscan
IPR001902FamilySLC26A/SulP transporterInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR048570Domain26S proteasome non-ATPase regulatory subunit 1/RPN2, N-terminal domainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR040623Domain26S proteasome regulatory subunit RPN2, C-terminalInterproscan
IPR016642Family26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunitInterproscan
IPR002015RepeatProteasome/cyclosome repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22972SERINE/THREONINE PROTEIN KINASEInterproscan
PTHR11668SERINE/THREONINE PROTEIN PHOSPHATASEInterproscan
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan
PTHR19384NITRIC OXIDE SYNTHASE-RELATEDInterproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR11814SULFATE TRANSPORTERInterproscan
PTHR1094326S PROTEASOME NON-ATPASE REGULATORY SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0090141Biological Processpositive regulation of mitochondrial fissionInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0004722Molecular Functionprotein serine/threonine phosphatase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0032922Biological Processcircadian regulation of gene expressionInterproscan
GO:0042752Biological Processregulation of circadian rhythmInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0001055Molecular FunctionRNA polymerase II activityInterproscan
GO:0005665Cellular ComponentRNA polymerase II, core complexInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0009086Biological Processmethionine biosynthetic processInterproscan
GO:0010181Molecular FunctionFMN bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0030586Molecular Function[methionine synthase] reductase (NADPH) activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0050667Biological Processhomocysteine metabolic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015116Molecular Functionsulfate transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0008540Cellular Componentproteasome regulatory particle, base subcomplexInterproscan
GO:0034515Cellular Componentproteasome storage granuleInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0000502Cellular Componentproteasome complexInterproscan
GO:0030234Molecular Functionenzyme regulator activityInterproscan
GO:0042176Biological Processregulation of protein catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06269PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunitEC:3.1.3.16
Proteasomeko03051deepkoala
Cobalamin transport and metabolismko04980deepkoala
DNA repair and recombination proteinsko03400deepkoala
Spliceosomeko03041deepkoala

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