Detailed information of g1234.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: GKU85864.1, hypothetical protein SLEP1_g477 [Shorea leprosula]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P04464Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3
P02597Calmodulin, striated muscle OS=Gallus gallus OX=9031 GN=CCM1 PE=3 SV=2
Q40302Calmodulin OS=Macrocystis pyrifera OX=35122 PE=2 SV=3
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03151TPTTriose-phosphate Transporter familyFamilyInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00397WWWW domainDomainInterproscan
PF00168C2C2 domainDomainInterproscan
PF08925DUF1907Domain of Unknown Function (DUF1907)DomainInterproscan
PF00889EF_TSElongation factor TSFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050186FamilyTriose Phosphate/Phosphate TranslocatorInterproscan
IPR004853DomainSugar phosphate transporter domainInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR050145FamilyCalmodulin and Centrin Calcium-Binding FamiliesInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR053210FamilyAnkyrin repeat domain-containing protein 12Interproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR000569DomainHECT domainInterproscan
IPR001202DomainWW domainInterproscan
IPR000008DomainC2 domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR024928FamilyE3 ubiquitin-protein ligase, SMURF1 typeInterproscan
IPR050409FamilyE3 ubiquitin-protein ligaseInterproscan
IPR036020Homologous_superfamilyWW domain superfamilyInterproscan
IPR015021DomainEster hydrolase C11orf54, Domain of unknown function DUF1907Interproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001816FamilyTranslation elongation factor EFTs/EF1BInterproscan
IPR036402Homologous_superfamilyElongation factor Ts, dimerisation domain superfamilyInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR014039DomainTranslation elongation factor EFTs/EF1B, dimerisationInterproscan
IPR018101Conserved_siteTranslation elongation factor Ts, conserved siteInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11132SOLUTE CARRIER FAMILY 35Interproscan
PTHR23050CALCIUM BINDING PROTEINInterproscan
PTHR48051-Interproscan
PTHR24149ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 12Interproscan
PTHR11254HECT DOMAIN UBIQUITIN-PROTEIN LIGASEInterproscan
PTHR13204PTD012 PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR11741ELONGATION FACTOR TSInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005457Molecular FunctionGDP-fucose transmembrane transporter activityInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0015297Molecular Functionantiporter activityInterproscan
GO:0036066Biological Processprotein O-linked fucosylationInterproscan
GO:0036085Biological ProcessGDP-fucose import into Golgi lumenInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0030514Biological Processnegative regulation of BMP signaling pathwayInterproscan
GO:0030579Biological Processobsolete ubiquitin-dependent SMAD protein catabolic processInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016788Molecular Functionhydrolase activity, acting on ester bondsInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0006414Biological Processtranslational elongationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02357tsf, TSFM; elongation factor Ts-Exosomeko04147deepkoala
Mitochondrial biogenesisko03029deepkoala
Transportersko02000deepkoala
Mitochondrial biogenesisko03029deepkoala

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