Detailed information of g1235.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_045174842.2, COMM domain-containing protein 9-like isoform X2 [Mercenaria mercenaria]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2TBN5COMM domain-containing protein 9 OS=Bos taurus OX=9913 GN=COMMD9 PE=2 SV=1
Q9P000COMM domain-containing protein 9 OS=Homo sapiens OX=9606 GN=COMMD9 PE=1 SV=2
Q8K2Q0COMM domain-containing protein 9 OS=Mus musculus OX=10090 GN=Commd9 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05916Sld5GINS complex proteinFamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF07258COMM_domainCOMM domainDomainInterproscan
PF20923COMMD9_NCOMMD9, N-terminal domainDomainInterproscan
PF07061Swi5Swi5FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005339FamilyGINS complex, subunit Psf1Interproscan
IPR021151DomainGINS subunit, domain AInterproscan
IPR036224Homologous_superfamilyGINS, helical bundle-like domain superfamilyInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR017920DomainCOMM domainInterproscan
IPR037360FamilyCOMM domain-containing protein 9Interproscan
IPR048676DomainCOMMD9, N-terminal domainInterproscan
IPR010760FamilyDNA repair protein, Swi5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12914PARTNER OF SLD5Interproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR15663COMM DOMAIN-CONTAINING PROTEIN 9Interproscan
PTHR28529DNA REPAIR PROTEIN SWI5 HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000811Cellular ComponentGINS complexInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:1902983Biological ProcessDNA strand elongation involved in mitotic DNA replicationInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0032798Cellular ComponentSwi5-Sfr1 complexInterproscan
GO:0034974Cellular ComponentSwi5-Swi2 complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14810DDX56, DBP9; ATP-dependent RNA helicase DDX56/DBP9EC:5.6.2.7
Ubiquitin systemko04121deepkoala
DNA repair and recombination proteinsko03400deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala
Ribosome biogenesisko03009deepkoala

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