Detailed information of g1236.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012559229.1, uncharacterized protein LOC101241803 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8BIQ5Cleavage stimulation factor subunit 2 OS=Mus musculus OX=10090 GN=Cstf2 PE=1 SV=2
Q8HXM1Cleavage stimulation factor subunit 2 OS=Bos taurus OX=9913 GN=CSTF2 PE=2 SV=1
P33240Cleavage stimulation factor subunit 2 OS=Homo sapiens OX=9606 GN=CSTF2 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14327CSTF2_hingeHinge domain of cleavage stimulation factor subunit 2FamilyInterproscan
PF14304CSTF_CTranscription termination and cleavage factor C-terminalDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF14881Tubulin_3Tubulin domainDomainInterproscan
PF02772S-AdoMet_synt_MS-adenosylmethionine synthetase, central domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR038192Homologous_superfamilyTranscription termination and cleavage factor, C-terminal domain superfamilyInterproscan
IPR025742DomainCleavage stimulation factor subunit 2, hinge domainInterproscan
IPR026896DomainTranscription termination and cleavage factor, C-terminal domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR049942FamilyDML1/MisatoInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR029209DomainDML1/Misato, tubulin domainInterproscan
IPR002133FamilyS-adenosylmethionine synthetaseInterproscan
IPR022631Conserved_siteS-adenosylmethionine synthetase, conserved siteInterproscan
IPR022629DomainS-adenosylmethionine synthetase, central domainInterproscan
IPR022636Homologous_superfamilyS-adenosylmethionine synthetase superfamilyInterproscan
IPR001632DomainG-protein, beta subunitInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR016346FamilyGuanine nucleotide-binding protein, beta subunitInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR033192FamilyOuter dynein arm-docking complex subunit 3Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45735CLEAVAGE STIMULATION FACTOR SUBUNIT 2Interproscan
PTHR13391MITOCHONDRIAL DISTRIBUTION REGULATOR MISATOInterproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR11964S-ADENOSYLMETHIONINE SYNTHETASEInterproscan
PTHR19850GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETAInterproscan
PTHR46518COILED-COIL DOMAIN-CONTAINING PROTEIN 151Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005847Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0098789Biological Processobsolete pre-mRNA cleavage required for polyadenylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0007005Biological Processmitochondrion organizationInterproscan
GO:0004478Molecular Functionmethionine adenosyltransferase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006556Biological ProcessS-adenosylmethionine biosynthetic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005834Cellular Componentheterotrimeric G-protein complexInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0030159Molecular Functionsignaling receptor complex adaptor activityInterproscan
GO:0003341Biological Processcilium movementInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0035253Cellular Componentciliary rootletInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0036158Biological Processouter dynein arm assemblyInterproscan
GO:0097542Cellular Componentciliary tipInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

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