Gene detail

Detailed information of g1239.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_033102726.1, 77 kDa echinoderm microtubule-associated protein-like isoform X3 [Anneissia japonica]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
O00423	Echinoderm microtubule-associated protein-like 1 OS=Homo sapiens OX=9606 GN=EML1 PE=1 SV=3
Q4V8C3	Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2
Q05BC3	Echinoderm microtubule-associated protein-like 1 OS=Mus musculus OX=10090 GN=Eml1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF03451	HELP	HELP motif	Repeat	Interproscan
PF18597	SH3_19	Myosin X N-terminal SH3 domain	Domain	Interproscan
PF00169	PH	PH domain	Domain	Interproscan
PF00063	Myosin_head	Myosin head (motor domain)	Domain	Interproscan
PF00854	PTR2	POT family	Family	Interproscan
PF15043	CNRIP1	CB1 cannabinoid receptor-interacting protein 1	Family	Interproscan
PF02782	FGGY_C	FGGY family of carbohydrate kinases, C-terminal domain	Domain	Interproscan
PF01180	DHO_dh	Dihydroorotate dehydrogenase	Domain	Interproscan
PF13359	DDE_Tnp_4	DDE superfamily endonuclease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR051426	Family	Peflin/Sorcin Calcium-Binding	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR050630	Family	WD repeat Echinoderm Microtubule-associated Protein-like	Interproscan
IPR005108	Conserved_site	HELP motif	Interproscan
IPR001609	Domain	Myosin head, motor domain	Interproscan
IPR000048	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR040640	Domain	Myosin X, N-terminal SH3 domain	Interproscan
IPR051724	Family	Actin-based Motor Myosin	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR000109	Family	Proton-dependent oligopeptide transporter family	Interproscan
IPR029204	Family	CB1 cannabinoid receptor-interacting protein 1	Interproscan
IPR018485	Domain	Carbohydrate kinase FGGY, C-terminal	Interproscan
IPR043129	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan
IPR050074	Family	Dihydroorotate dehydrogenase	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR001295	Conserved_site	Dihydroorotate dehydrogenase, conserved site	Interproscan
IPR005720	Domain	Dihydroorotate dehydrogenase, catalytic	Interproscan
IPR027806	Domain	Harbinger transposase-derived nuclease domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46212	PEFLIN	Interproscan
PTHR13720	WD-40 REPEAT PROTEIN	Interproscan
PTHR46049	AGAP003327-PA	Interproscan
PTHR11654	OLIGOPEPTIDE TRANSPORTER-RELATED	Interproscan
PTHR31952	CB1 CANNABINOID RECEPTOR-INTERACTING PROTEIN 1	Interproscan
PTHR48109	DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATED	Interproscan
PTHR23080	THAP DOMAIN PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0048208	Biological Process	COPII vesicle coating	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000226	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0072686	Cellular Component	mitotic spindle	Interproscan
GO:0003774	Molecular Function	cytoskeletal motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016459	Cellular Component	myosin complex	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0031718	Molecular Function	type 1 cannabinoid receptor binding	Interproscan
GO:2000272	Biological Process	negative regulation of signaling receptor activity	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0016301	Molecular Function	kinase activity	Interproscan
GO:0004152	Molecular Function	dihydroorotate dehydrogenase activity	Interproscan
GO:0005743	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0006207	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan
GO:0009220	Biological Process	pyrimidine ribonucleotide biosynthetic process	Interproscan
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18595	EML1_2; echinoderm microtubule-associated protein-like 1/2	-	Cytoskeleton proteins	ko04812	deepkoala