Gene detail

Detailed information of g124.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_020907968.1, complement C1q subcomponent subunit C isoform X2 [Exaiptasia diaphana]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P81004	Non-selective voltage-gated ion channel VDAC2 OS=Xenopus laevis OX=8355 GN=vdac2 PE=1 SV=1
P82013	Non-selective voltage-gated ion channel VDAC2 OS=Meleagris gallopavo OX=9103 GN=VDAC2 PE=1 SV=2
P68002	Non-selective voltage-gated ion channel VDAC2 OS=Bos taurus OX=9913 GN=VDAC2 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000002 (this species only)
Orthogroup (gene family)	OG0000030 (this species only)
Orthogroup (gene family)	OG0000031 (this species only)
Orthogroup (gene family)	OG0000499 (this species only)
Orthogroup (gene family)	OG0000725 (this species only)
Orthogroup (gene family)	OG0001026 (this species only)
Orthogroup (gene family)	OG0001139 (this species only)
Orthogroup (gene family)	OG0007549 (this species only)
Orthogroup (gene family)	OG0007847 (this species only)
Orthogroup (gene family)	OG0014658 (this species only)
Orthogroup (gene family)	OG0019152 (this species only)
Orthogroup (gene family)	OG0048335 (this species only)
Orthogroup (gene family)	OG0059557 (this species only)
Orthogroup (gene family)	OG0172041 (this species only)
Orthogroup (gene family)	OG0174091 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00229 all species →	TNF	TNF(Tumour Necrosis Factor) family	Domain	Interproscan
PF01391 all species →	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan
PF05380 all species →	Peptidase_A17	Pao retrotransposon peptidase	Family	Interproscan
PF18701 all species →	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan
PF05585 all species →	DUF1758	Putative peptidase (DUF1758)	Family	Interproscan
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF03564 all species →	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF01400 all species →	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan
PF01459 all species →	Porin_3	Eukaryotic porin	Family	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001223 all species →	Domain	Glycoside hydrolase family 18, catalytic domain	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR050542 all species →	Family	Glycosyl Hydrolase 18 Family Chitinases	Interproscan
IPR006052 all species →	Domain	Tumour necrosis factor domain	Interproscan
IPR008160 all species →	Repeat	Collagen triple helix repeat	Interproscan
IPR008983 all species →	Homologous_superfamily	Tumour necrosis factor-like domain superfamily	Interproscan
IPR021109 all species →	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR008042 all species →	Family	Retrotransposon, Pao	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR040676 all species →	Domain	Domain of unknown function DUF5641	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR008737 all species →	Domain	Peptidase aspartic, putative	Interproscan
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR005312 all species →	Family	Protein of unknown function DUF1759	Interproscan
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR047908 all species →	Domain	Testis-specific serine/threonine kinase 4, catalytic domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR001506 all species →	Domain	Peptidase M12A	Interproscan
IPR034035 all species →	Domain	Astacin-like metallopeptidase domain	Interproscan
IPR006026 all species →	Domain	Peptidase, metallopeptidase	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR001925 all species →	Family	Porin, eukaryotic type	Interproscan
IPR027246 all species →	Family	Eukaryotic porin/Tom40	Interproscan
IPR023614 all species →	Homologous_superfamily	Porin domain superfamily	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45708 all species →	ENDOCHITINASE	Interproscan
PTHR11471 all species →	TUMOR NECROSIS FACTOR FAMILY MEMBER	Interproscan
PTHR22955 all species →	RETROTRANSPOSON	Interproscan
PTHR24346 all species →	MAP/MICROTUBULE AFFINITY-REGULATING KINASE	Interproscan
PTHR10127 all species →	DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING	Interproscan
PTHR11743 all species →	VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL	Interproscan
PTHR24246 all species →	OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004568 all species →	Molecular Function	chitinase activity	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0005164 all species →	Molecular Function	tumor necrosis factor receptor binding	Interproscan
GO:0006955 all species →	Biological Process	immune response	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0032793 all species →	Biological Process	positive regulation of CREB transcription factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0005741 all species →	Cellular Component	mitochondrial outer membrane	Interproscan
GO:0008308 all species →	Molecular Function	voltage-gated monoatomic anion channel activity	Interproscan
GO:0098656 all species →	Biological Process	monoatomic anion transmembrane transport	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08811	TSSK, STK22; testis-specific serine kinase	EC:2.7.11.1	Cilium and associated proteins	ko03037	deepkoala
K15040	VDAC2; voltage-dependent anion channel protein 2	-	Ion channels	ko04040	deepkoala
K24213	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.