Detailed information of g1242.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020896898.1, SOSS complex subunit B2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q96AH0SOSS complex subunit B2 OS=Homo sapiens OX=9606 GN=NABP1 PE=1 SV=1
Q5PRC7SOSS complex subunit B2 OS=Danio rerio OX=7955 GN=nabp1 PE=2 SV=1
A5D7P8SOSS complex subunit B2 OS=Bos taurus OX=9913 GN=NABP1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10186ATG14Vacuolar sorting 38 and autophagy-related subunit 14FamilyInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF00692dUTPasedUTPaseDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018791FamilyUV radiation resistance protein/autophagy-related protein 14Interproscan
IPR038274Homologous_superfamilyAtg6/Beclin C-terminal domain superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR036157Homologous_superfamilydUTPase-like superfamilyInterproscan
IPR033704DomaindUTPase, trimericInterproscan
IPR029054DomaindUTPase-likeInterproscan
IPR008181FamilyDeoxyuridine triphosphate nucleotidohydrolaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR051231FamilySOSS complex subunit BInterproscan
IPR039694FamilyWD repeat-containing protein 11Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15157UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEINInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11241DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASEInterproscan
PTHR24020COLLAGEN ALPHAInterproscan
PTHR13356OB FOLD NUCLEIC ACID BINDING PROTEIN-RELATEDInterproscan
PTHR14593WD REPEAT-CONTAINING PROTEIN 11Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0000323Cellular Componentlytic vacuoleInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0035493Biological ProcessSNARE complex assemblyInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0004170Molecular FunctiondUTP diphosphatase activityInterproscan
GO:0006226Biological ProcessdUMP biosynthetic processInterproscan
GO:0046081Biological ProcessdUTP catabolic processInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0007093Biological Processmitotic cell cycle checkpoint signalingInterproscan
GO:0010212Biological Processresponse to ionizing radiationInterproscan
GO:0070876Cellular ComponentSOSS complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24260WDR11; WD repeat-containing protein 11-Membrane traffickingko04131deepkoala
Cilium and associated proteinsko03037deepkoala

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