Detailed information of g1243.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047138209.1, ribonuclease kappa-B [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7Z0Q2Ribonuclease kappa-B OS=Ceratitis capitata OX=7213 PE=3 SV=1
Q8MSF5Ribonuclease kappa OS=Drosophila melanogaster OX=7227 GN=RNASEK PE=3 SV=1
Q566G2Ribonuclease kappa-B OS=Xenopus laevis OX=8355 GN=rnasek-b PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyMH1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan
PF00264TyrosinaseCommon central domain of tyrosinaseDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF13621Cupin_8Cupin-like domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF13961DUF4219Domain of unknown function (DUF4219)DomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF03165MH1MH1 domainDomainInterproscan
PF03166MH2MH2 domainFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF15469Sec5Exocyst complex component Sec5RepeatInterproscan
PF13833EF-hand_8EF-hand domain pairDomainInterproscan
PF18201PIH1_CSPIH1 CS-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005446FamilyVoltage-dependent calcium channel, L-type, alpha-1 subunitInterproscan
IPR002077FamilyVoltage-dependent calcium channel, alpha-1 subunitInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR050599FamilyVoltage-dependent calcium channel alpha-1 subunitInterproscan
IPR050316FamilyTyrosinase and HemocyaninInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002227DomainTyrosinase copper-binding domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR008922Homologous_superfamilyDi-copper centre-containing domain superfamilyInterproscan
IPR041667DomainCupin-like domain 8Interproscan
IPR003347DomainJmjC domainInterproscan
IPR025314DomainDomain of unknown function DUF4219Interproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR001132DomainSMAD domain, Dwarfin-typeInterproscan
IPR036578Homologous_superfamilySMAD MH1 domain superfamilyInterproscan
IPR017855Homologous_superfamilySMAD-like domain superfamilyInterproscan
IPR013790FamilyDwarfinInterproscan
IPR013019DomainMAD homology, MH1Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR029175FamilyExocyst complex component EXOC2/Sec5Interproscan
IPR039481DomainExocyst complex component EXOC2/Sec5, N-terminal domainInterproscan
IPR026770FamilyRibonuclease kappaInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR026697FamilyDynein axonemal assembly factor 6Interproscan
IPR041442DomainPIH1D1/2/3, CS-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45628VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1Interproscan
PTHR11474TYROSINASE FAMILY MEMBERInterproscan
PTHR12461HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATEDInterproscan
PTHR35317OS04G0629600 PROTEINInterproscan
PTHR13703SMADInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13043EXOCYST COMPLEX COMPONENT SEC5Interproscan
PTHR31733RIBONUCLEASE KAPPAInterproscan
PTHR21083TWISTERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005245Molecular Functionvoltage-gated calcium channel activityInterproscan
GO:0005891Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0008331Molecular Functionhigh voltage-gated calcium channel activityInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0016706Molecular Function2-oxoglutarate-dependent dioxygenase activityInterproscan
GO:0031591Biological Processwybutosine biosynthetic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007179Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0032924Biological Processactivin receptor signaling pathwayInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0060395Biological ProcessSMAD protein signal transductionInterproscan
GO:0070411Molecular FunctionI-SMAD bindingInterproscan
GO:0071144Cellular Componentheteromeric SMAD protein complexInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0000145Cellular ComponentexocystInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0006893Biological ProcessGolgi to plasma membrane transportInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0090304Biological Processnucleic acid metabolic processInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051087Molecular Functionprotein-folding chaperone bindingInterproscan
GO:0070286Biological Processaxonemal dynein complex assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24253DNAAF6, PIH1D3; dynein axonemal assembly factor 6-Transfer RNA biogenesisko03016deepkoala
AGE-RAGE signaling pathway in diabetic complicationsko04933deepkoala
Cytoskeleton proteinsko04812deepkoala

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