Detailed information of g12431.t1 in Acropora digitifera

Genomic Location: chr6Alt:623281...629195
NR annotation: XP_029185528.2, rabenosyn-5-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80Y56Rabenosyn-5 OS=Mus musculus OX=10090 GN=Rbsn PE=1 SV=1
Q9H1K0Rabenosyn-5 OS=Homo sapiens OX=9606 GN=RBSN PE=1 SV=2
P32609Vacuolar segregation protein PEP7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PEP7 PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11464
all species →		RbsnRabenosyn Rab binding domainDomainInterproscan
PF01363
all species →		FYVEFYVE zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR000306
all species →		DomainFYVE zinc fingerInterproscan
IPR052727
all species →		FamilyRab4/Rab5 effector domain-containing proteinInterproscan
IPR017455
all species →		DomainZinc finger, FYVE-relatedInterproscan
IPR036531
all species →		Homologous_superfamilyRabenosyn, Rab binding domain superfamilyInterproscan
IPR021565
all species →		DomainRabenosyn, Rab binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13510
all species →		FYVE-FINGER-CONTAINING RAB5 EFFECTOR PROTEIN RABENOSYN-5-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12481RBSN, ZFYVE20; rabenosyn-5-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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