Gene detail

Detailed information of g12462.t1 in Montipora capitata

Genomic Location: Sc0000400:207352...222493
NR annotation: XP_044168013.1, protocadherin-like wing polarity protein stan, partial [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q08174	Protocadherin-1 OS=Homo sapiens OX=9606 GN=PCDH1 PE=1 SV=2
Q9H251	Cadherin-23 OS=Homo sapiens OX=9606 GN=CDH23 PE=1 SV=2
Q2PZL6	Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00028	Cadherin	Cadherin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002126	Domain	Cadherin-like	Interproscan
IPR015919	Homologous_superfamily	Cadherin-like superfamily	Interproscan
IPR020894	Conserved_site	Cadherin conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24026	FAT ATYPICAL CADHERIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan