Detailed information of g1247.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBT5572606.1, primosomal protein N' [Alphaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P05445Replication restart protein PriA OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=priA PE=3 SV=1
Q4UL64Replication restart protein PriA OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=priA PE=3 SV=1
Q1RI08Replication restart protein PriA OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=priA PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18074PriA_CPrimosomal protein N C-terminal domainDomainInterproscan
PF18319PriA_CRRPriA DNA helicase Cys-rich region (CRR) domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00067p450Cytochrome P450DomainInterproscan
PF00211Guanylate_cycAdenylate and Guanylate cyclase catalytic domainDomainInterproscan
PF07019EMC6EMC6FamilyInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF12937F-box-likeF-box-likeDomainInterproscan
PF00209SNFSodium:neurotransmitter symporter familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR041236DomainPrimosomal protein N, C-terminal domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR050880FamilyPrimosomal protein N' helicaseInterproscan
IPR040498DomainPriA DNA helicase, Cys-rich region (CRR) domainInterproscan
IPR005259FamilyPrimosomal protein N'Interproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR052803FamilyPrimary Cilium-Associated JouberinInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR002401FamilyCytochrome P450, E-class, group IInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR050479FamilyCytochrome P450, families 11 and 27Interproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR001054DomainAdenylyl cyclase class-3/4/guanylyl cyclaseInterproscan
IPR029787Homologous_superfamilyNucleotide cyclaseInterproscan
IPR033587FamilyMeiosis 1 arrest proteinInterproscan
IPR010742FamilyRespirasome Complex Assembly Factor 1Interproscan
IPR029008FamilyER membrane protein complex subunit 6-likeInterproscan
IPR050125FamilyG-protein coupled receptor opsinsInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR001810DomainF-box domainInterproscan
IPR000175FamilySodium:neurotransmitter symporterInterproscan
IPR037272Homologous_superfamilySodium:neurotransmitter symporter superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30580PRIMOSOMAL PROTEIN NInterproscan
PTHR44499JOUBERINInterproscan
PTHR24279-Interproscan
PTHR45627ADENYLATE CYCLASE TYPE 1Interproscan
PTHR28642MEIOSIS 1 ARREST PROTEINInterproscan
PTHR12906PROTEIN C20ORF24 RAB5-INTERACTING PROTEINInterproscan
PTHR24240OPSINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11616SODIUM/CHLORIDE DEPENDENT TRANSPORTERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006268Biological ProcessDNA unwinding involved in DNA replicationInterproscan
GO:0006270Biological ProcessDNA replication initiationInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0044458Biological Processmotile cilium assemblyInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0005743Cellular Componentmitochondrial inner membraneInterproscan
GO:0006700Biological ProcessC21-steroid hormone biosynthetic processInterproscan
GO:0006704Biological Processglucocorticoid biosynthetic processInterproscan
GO:0008203Biological Processcholesterol metabolic processInterproscan
GO:0034650Biological Processcortisol metabolic processInterproscan
GO:0071375Biological Processcellular response to peptide hormone stimulusInterproscan
GO:0009190Biological Processcyclic nucleotide biosynthetic processInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0004016Molecular Functionadenylate cyclase activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007189Biological Processadenylate cyclase-activating G protein-coupled receptor signaling pathwayInterproscan
GO:0007127Biological Processmeiosis IInterproscan
GO:0007283Biological ProcessspermatogenesisInterproscan
GO:0051308Biological Processmale meiosis chromosome separationInterproscan
GO:0097250Biological Processmitochondrial respirasome assemblyInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21387AJAP1; adherens junction-associated protein 1-DNA repair and recombination proteinsko03400deepkoala
Cytoskeleton proteinsko04812deepkoala

TOP