Detailed information of g125.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3037011.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P25867Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster OX=7227 GN=eff PE=1 SV=1
P35129Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans OX=6239 GN=let-70 PE=1 SV=1
P61077Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens OX=9606 GN=UBE2D3 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE2|UBC|UBC
Ubiquitin FamilyUBD|UBC-like|UBC
Ubiquitin FamilyUBD|UBC-like|UEV
Ubiquitin FamilyE2|UEV|UEV

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00179UQ_conUbiquitin-conjugating enzymeDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF04991LicDLicD familyDomainInterproscan
PF08385DHC_N1Dynein heavy chain, N-terminal region 1FamilyInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF01562Pep_M12B_propepReprolysin family propeptideFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR000608DomainUbiquitin-conjugating enzyme E2Interproscan
IPR023313Active_siteUbiquitin-conjugating enzyme, active siteInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR052942FamilyLipopolysaccharide cholinephosphotransferaseInterproscan
IPR007074FamilyLicD familyInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR010998Homologous_superfamilyIntegrase/recombinase, N-terminalInterproscan
IPR013594DomainDynein heavy chain, tailInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR002870DomainPeptidase M12B, propeptideInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24068UBIQUITIN-CONJUGATING ENZYME E2Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR43404LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICDInterproscan
PTHR35617PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR44281SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOGInterproscan
PTHR46532MALE FERTILITY FACTOR KL5Interproscan
PTHR21521UNCHARACTERIZEDInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR46208MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM70Interproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR11905ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0061631Molecular Functionubiquitin conjugating enzyme activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0007099Biological Processcentriole replicationInterproscan
GO:0005858Cellular Componentaxonemal dynein complexInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008320Molecular Functionprotein transmembrane transporter activityInterproscan
GO:0030150Biological Processprotein import into mitochondrial matrixInterproscan
GO:0030943Molecular Functionmitochondrion targeting sequence bindingInterproscan
GO:0031307Cellular Componentobsolete integral component of mitochondrial outer membraneInterproscan
GO:0045039Biological Processprotein insertion into mitochondrial inner membraneInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03470rnhB; ribonuclease HIIEC:3.1.26.4
Ubiquitin systemko04121deepkoala
Transportersko02000deepkoala
DNA replication proteinsko03032deepkoala

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